Gm30570 (predicted gene, 30570) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Gm30570 (predicted gene, 30570) Mus musculus
Analyze
Symbol: Gm30570
Name: predicted gene, 30570
RGD ID: 9656947
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39104,156,426 - 4,163,120 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl104,156,426 - 4,192,693 (-)EnsemblGRCm39 Ensembl
GRCm38104,206,426 - 4,213,120 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl104,206,426 - 4,213,114 (-)EnsemblGRCm38mm10GRCm38
Celera104,130,109 - 4,136,770 (-)NCBICelera
Cytogenetic Map10A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14610273   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in Gm30570
250 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11532718Sluc44f_msusceptibility to lung cancer 44f (mouse)10126289265Mouse
1357813Ath20_matherosclerosis 20 (mouse)Not determined10328318537283334Mouse
11532717Sluc44g_msusceptibility to lung cancer 44g (mouse)10126289265Mouse
1300881Sluc29_msusceptibility to lung cancer 29 (mouse)Not determined10126289265Mouse
12879494Facq1_mfear acquisition QTL 1 (mouse)10131279130Mouse
1300759Geot_mgeotaxia (mouse)Not determined10126289265Mouse
1300790Pgia6_mproteoglycan induced arthritis 6 (mouse)Not determined10381017137810295Mouse
15039341Nmrs28_mNAFLD-associated magnetic resonance shift 28 (mouse)1035100134351001Mouse
11533917Mts2_mmammary tumor susceptibility 2 (mouse)10126289265Mouse
11532725Sluc44b_msusceptibility to lung cancer 44b (mouse)10126289265Mouse
11532724Sluc44c_msusceptibility to lung cancer 44c (mouse)10126289265Mouse
11532723Sluc44d_msusceptibility to lung cancer 44d (mouse)10126289265Mouse
11532722Sluc44e_msusceptibility to lung cancer 44e (mouse)10126289265Mouse
11532721Sluc44_msusceptibility to lung cancer 44 (mouse)10126289265Mouse
11532720Sluc44a_msusceptibility to lung cancer 44a (mouse)10126289265Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000213553
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl104,156,426 - 4,163,114 (-)Ensembl
GRCm38.p6 Ensembl104,206,426 - 4,213,114 (-)Ensembl
Ensembl Acc Id: ENSMUST00000313466
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl104,158,088 - 4,192,642 (-)Ensembl
Ensembl Acc Id: ENSMUST00000313467
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl104,158,791 - 4,192,693 (-)Ensembl
RefSeq Acc Id: NR_152620
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39104,156,426 - 4,163,120 (-)NCBI
GRCm38104,206,426 - 4,213,120 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000111266 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000213553 ENTREZGENE
MGD MGI:5589729 ENTREZGENE
NCBI Gene Gm30570 ENTREZGENE
PhenoGen Gm30570 PhenoGen
RNAcentral URS00009BE6D0 RNACentral
  URS0000AAC22C RNACentral