Gm30083 (predicted gene, 30083) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Gm30083 (predicted gene, 30083) Mus musculus
Analyze
No known orthologs.
Symbol: Gm30083
Name: predicted gene, 30083
RGD ID: 9644912
MGI Page MGI
Description: Predicted to enable transmembrane signaling receptor activity. Predicted to be active in cell surface and plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: anthrax toxin receptor-like; uncharacterized protein LOC102631856
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391433,710,374 - 33,738,860 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1433,710,374 - 33,737,139 (-)EnsemblGRCm39 Ensembl
GRCm381433,988,417 - 34,016,903 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1433,988,417 - 34,015,182 (-)EnsemblGRCm38mm10GRCm38
Celera1430,242,954 - 30,284,230 (-)NCBICelera
Cytogenetic Map14BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm30083Mousecell surface is_active_inIBAPANTHER:PTN000412053 more ...2290270 GO_CentralGO_REF:0000033
Gm30083Mouseplasma membrane is_active_inIBAPANTHER:PTN000412053 more ...2290270 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Gm30083Mousetransmembrane signaling receptor activity enablesIBAPANTHER:PTN000412053 and UniProtKB:Q9H6X22290270 GO_CentralGO_REF:0000033



.

.
Variants in Gm30083
1171 total Variants

1 to 10 of 21 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
14696688Rfq2_mrearing frequency QTL 2, males (mouse)143372195735721957Mouse

1 to 10 of 21 rows






Ensembl Acc Id: ENSMUST00000227523
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1433,721,933 - 33,722,681 (-)Ensembl
GRCm38.p6 Ensembl1433,999,976 - 34,000,724 (-)Ensembl
Ensembl Acc Id: ENSMUST00000227795   ⟹   ENSMUSP00000153809
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1433,710,374 - 33,737,139 (-)Ensembl
GRCm38.p6 Ensembl1433,988,417 - 34,015,182 (-)Ensembl
RefSeq Acc Id: NM_001374165   ⟹   NP_001361094
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391433,710,374 - 33,737,156 (-)NCBI
GRCm381433,988,417 - 34,015,199 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001374166   ⟹   NP_001361095
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391433,710,374 - 33,738,860 (-)NCBI
GRCm381433,988,417 - 34,016,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006519765   ⟹   XP_006519828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391433,710,374 - 33,738,860 (-)NCBI
GRCm381433,988,417 - 34,016,903 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006519766   ⟹   XP_006519829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391433,710,374 - 33,735,682 (-)NCBI
GRCm381433,988,417 - 34,013,725 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003951017
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391433,710,374 - 33,737,261 (-)NCBI
GRCm381433,988,417 - 34,015,304 (-)NCBI
Sequence:
Protein RefSeqs NP_001361094 (Get FASTA)   NCBI Sequence Viewer  
  NP_001361095 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519828 (Get FASTA)   NCBI Sequence Viewer  
  XP_006519829 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000153809
  ENSMUSP00000153809.2
RefSeq Acc Id: XP_006519828   ⟸   XM_006519765
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006519829   ⟸   XM_006519766
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001361095   ⟸   NM_001374166
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001361094   ⟸   NM_001374165
- Peptide Label: isoform 1 precursor
- UniProtKB: A0A2I3BPJ2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000153809   ⟸   ENSMUST00000227795
VWFA

Name Modeler Protein Id AA Range Protein Structure
AF-A0A2I3BPJ2-F1-model_v2 AlphaFold A0A2I3BPJ2 1-573 view protein structure



1 to 18 of 18 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000115726 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000227795 ENTREZGENE
  ENSMUST00000227795.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.410 UniProtKB/TrEMBL
InterPro Anthrax_toxin_rcpt_extracel UniProtKB/TrEMBL
  VWF_A UniProtKB/TrEMBL
  vWFA_dom_sf UniProtKB/TrEMBL
MGD MGI:5589242 ENTREZGENE
NCBI Gene Gm30083 ENTREZGENE
PANTHER ANTHRAX TOXIN RECEPTOR UniProtKB/TrEMBL
  GENE, 30083-RELATED UniProtKB/TrEMBL
Pfam Anth_Ig UniProtKB/TrEMBL
  VWA UniProtKB/TrEMBL
PhenoGen Gm30083 PhenoGen
PROSITE VWFA UniProtKB/TrEMBL
SMART VWA UniProtKB/TrEMBL
Superfamily-SCOP SSF53300 UniProtKB/TrEMBL
UniProt A0A2I3BPJ2 ENTREZGENE, UniProtKB/TrEMBL
1 to 18 of 18 rows