Advanced Search (OLGA)

Gene: Ncoa5 (nuclear receptor coactivator 5) Chinchilla lanigera

Analyze

Symbol:

Ncoa5

Name:

nuclear receptor coactivator 5

RGD ID:

8861164

Description:

ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); insulin receptor signaling pathway (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH adenosine deaminase deficiency (ortholog); focal epilepsy (ortholog); galactosialidosis (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	11,219,630 - 11,251,856 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	11,219,630 - 11,251,856 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenosine deaminase deficiency (ISO)

focal epilepsy (ISO)

galactosialidosis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glucose homeostasis (ISO)

insulin receptor signaling pathway (ISO)

negative regulation of insulin receptor signaling pathway (ISO)

Cellular Component

actin cytoskeleton (ISO)

nucleoplasm (ISO)

Molecular Function

chromatin binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Ncoa5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	11,219,630 - 11,251,856 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	11,219,630 - 11,251,856 (+)	NCBI	ChiLan1.0	ChiLan1.0

NCOA5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	46,060,991 - 46,089,962 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	46,060,991 - 46,089,962 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	44,689,630 - 44,718,601 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	44,123,031 - 44,151,987 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	44,123,042 - 44,151,959	NCBI
Celera	20	41,401,083 - 41,430,040 (-)	NCBI		Celera
Cytogenetic Map	20	q13.12	NCBI
HuRef	20	41,430,913 - 41,459,869 (-)	NCBI		HuRef
CHM1_1	20	44,592,261 - 44,621,218 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	47,797,006 - 47,826,000 (-)	NCBI		T2T-CHM13v2.0

Ncoa5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	164,842,273 - 164,876,794 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	164,842,277 - 164,876,787 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	165,000,353 - 165,034,871 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	165,000,357 - 165,034,867 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	164,825,857 - 164,860,279 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	164,691,562 - 164,725,984 (-)	NCBI		MGSCv36	mm8
Celera	2	170,937,626 - 170,972,075 (-)	NCBI		Celera
Cytogenetic Map	2	H3	NCBI
cM Map	2	85.32	NCBI

Ncoa5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	174,155,731 - 174,188,862 (-)	NCBI		GRCr8
mRatBN7.2	3	153,736,420 - 153,769,838 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	153,736,420 - 153,769,553 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	157,545,228 - 157,578,356 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	166,044,197 - 166,077,325 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	163,787,973 - 163,821,101 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	161,465,733 - 161,498,951 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	161,465,743 - 161,498,951 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	167,650,206 - 167,683,424 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	156,038,570 - 156,071,702 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	155,945,759 - 155,977,594 (-)	NCBI
Celera	3	152,341,716 - 152,374,833 (-)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

NCOA5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	51,800,851 - 51,829,899 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	51,793,942 - 51,823,005 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	42,398,240 - 42,427,247 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	43,483,976 - 43,502,930 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	43,485,294 - 43,493,521 (-)	Ensembl	panpan1.1		panPan2

NCOA5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	33,323,645 - 33,352,836 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	33,322,650 - 33,352,809 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	32,849,843 - 32,879,052 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	34,033,541 - 34,062,745 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	34,033,541 - 34,062,704 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	33,291,570 - 33,320,560 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	33,407,115 - 33,436,324 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	33,946,092 - 33,975,307 (-)	NCBI		UU_Cfam_GSD_1.0

Ncoa5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	191,510,760 - 191,542,165 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	6,964,434 - 6,999,129 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936514	6,964,397 - 6,996,997 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NCOA5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	48,231,497 - 48,263,944 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	48,231,490 - 48,263,956 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	53,877,059 - 53,897,207 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NCOA5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	17,791,969 - 17,822,298 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	17,791,813 - 17,820,974 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	66,426,934 - 66,457,273 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ncoa5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624790	8,503,611 - 8,538,238 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624790	8,503,605 - 8,538,243 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005392387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005392388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013518291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01039683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01047631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000010733 ⟹ ENSCLAP00000010601

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955445	11,219,630 - 11,251,856 (+)	Ensembl

RefSeq Acc Id:

XM_005392387 ⟹ XP_005392444

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955445	11,219,630 - 11,251,856 (+)	NCBI

Sequence:

show sequence

TTGCGACACCGCTGCGCCTGCCGCTGCGTGCGCGCCCTCTGCCCCTATCTCCACTCTACGCCCT
GGCCGCCATTGCCTCGTGCCCGCGCCGGTCGGTTGGTGGCGCCTTTGTCCTACGGCGGGCGGGT
GGGCTGAGGCGGAGGCTGCAGCGACAGGCCTGAGGCGAAGGAGTGGCCAGGAACCCGCCGCGCT
GGTAGCGATATTAATAAGGCAGCGGAAAGAAGAAATATGAATACGGCTCCATCAAGACCCAGCC
CCACACGAAGGGATCCATATGGCTTTGGAGACAGAGATACAAGGCGTGATCGATCTCCAATTCG
AGGAAGTCCAAGGAGAGAATCCAGGGATGGCAGAAATGGTCGGGATTCCCGGGATGGCAGAGAC
CTTCGAGACCCCCGAGACTTTCGGGAACACAGAGACAGCAGAGACATGCGGGATCACAGAGACA
GCAGAAGTTTTCGAGATACTCGAGACCTAAGGGATTTTAGAGACTTTCGTGACCTAAGAGACTC
TAGGGACTTTCGAGATCACCGGGACCCCATGTATGACAGATACAGAGACATAAGAGACTCCCGA
GACCCTATGTACAGGAGAGAGGGCTCTTATGACCGATACCTGCGGATGGATGACTATTGCAGGA
GAAAGGATGACTCTTACTTTGACCGTTACAGAGATGGCTTTGATGGGCGAGGCCCTCATGGCCC
AGAAAGTCGTGCAAAAGAGCGTTTGAAACGTGAGGAACGGCGTAGAGAAGAGCTTTATCGCCAA
TATTTTGAGGAAATCCAGAGACGCTTTGATGCTGAAAGACCTGTGGATTGTTCTGTAATTGTGG
TCAACAAGCAGACTAAAGATTATGCTGAATCTGTGGGACGGAAGGTCCGGGACCTAGGCATGGT
TGTGGATTTGATCTTCCTCAACACAGAGGTGTCACTATCACAAGCCTTGGAGGATGTTAGCAGA
GGAGGGTCTCCTTTTGCTATTGTCATCACCCAGCAACACCAGATTCACCGTTCCTGTACAGTCA
ACATCATGTTTGGAACTCCACAAGAGCATCGCAACATGCCCCAGGCAGATGCCATGGTGCTGGT
GGCCAGAAATTATGAGCGTTACAAGAATGAGTGCCGGGAGAAGGAACGTGAGGAGATTGCCAGA
CAGGCAGCCAAGATGGCTGATGAAGCCATCCTACAGGAAAGAGAGCGAGGAGGCCCTGAGGAAG
GAGTGCGTGGGGGTCACCCTCCAGCCATACAAAGCCTCATCAACCTGCTGGCAGATAACAGGTA
CCTCACTGCTGAAGAGACAGACAAGATCATCAACTACCTGCGAGAGCGAAAGGAGCGACTTATG
AGGAGCAGCGCCGACTCTCTGCCTGGCCCGATTTCCCGCCAACCACTTGGGGCGACCTCGGGTG
CCTCACTGAAGACACAGCCAAGCTCCCAGCCACTCCAGAGTGGCCAAGTGCTCCCTTCTGCTAC
ACCCAGTCCAGCTGCACCCCCCACCTCCCAGCAAGAGCTTCAGGCCAAAATCCTCAGTCTCTTC
AACAGTGGCACTGTTGTGGCCAACAGCAGCTCTGCATCACCCTCAGTTGCTTCCGGAAGCACCC
AGAACCAGAATTTTTCCACAGCGGCAAACAGCCAGCCTCAGCAAAGATCACAGGCCTCTGGCAA
CCAGCCTCCAAATATTTTGGGACAGGCAGGATCTGCTCGGAACCTGGGCCCCAGGCCTGGGGCT
CCTTCCCAAGGGCTGTTTGGCCAGCCTTCCAGTTGCCTAGCACCTGCTGGCAACATGGCTACCC
AGAGGCCCGTGTCTTCCACAGGTATTAACTTTGACAATCCAAGTGTACAGAAGGCTCTGGACAC
CCTGATCCAGAGTGGCCCTGCTCTCTCCCACCTGGTTAGCCAAACCTCAGCACAAGTGGGGCGG
CCCCAGGCCCCCATGGGATCTTACCAGAGGCATTACTGAGGCTAAATCATTCAACTACTTCCAG
TACCCTCATCCCCTGGCCTCCTTCTGCTTCATTCTAAATAGTTGTTTGGAGGATGTTCTTTGCG
CTCTCCAGCTCTACATCAAATGTCGTAAGTTTCTACCACCTGCTCTCCCTGCCCAAGGCCATAT
TGCTTGTTCCTTACAGAATCAGTTTATACTGCATTTGGGGGAGTCTTGTTTTGGTTTTGGGTAG
AAAATATCTCTTGGGTTGCTCAGGCAGTTCCAGGTGTCTGGGCTCAGTTTGTGTTTGATGGGGT
TTCTCTGGTCCCTCTGCTGGATTTGGAAAGAAGCCGCATCCCAGTTGGCTGAGTTCGGAATGGC
ATTTTACGTGAACAGTGGCTACCACCTTTGTTCATTTTGGGCCTACCAAGGCTTTCCCATTCGC
ACACATCTACCAGAGCTTGAACTCCTGACTAGTTTCACAGAGGAGCAGCTGGACATGGCAGGCA
CAATGTCACCATGTCCCCTTCCCCTGAGTATGGGTCTCTGCTCAGGGACGCAGATCAGCTGTGA
TGGATTGGTGAAGAGTGACCATGGTGGCCCCAGGAGGAGGAGCTATTTTGCCTGCATCGGAGTG
GCATTTCTTGGAATTTTTTTTCTTCCATTTCACTGAAGGATCTCCAGTGGACTGAACAGCTCCA
GTCACCAGTAGTTTGAAACAAACTGTGAATCTGGGCCCTACCACTCTTCCCTTACAATATTTCT
GTCAGCACCTCCCTCTCGTAAGCAGCACTTCATGGAGTCTGTTCTGAGAAAGCAGTCCTAGACT
GATAGTGGATGCCCATCTCTTTTTCAGTGATTTGTTTTGAGTTTTTGACTCAAAAGCCCAGGCT
TTTGTTTTCATCTGGACTCTTGTTCTGTTTTCTGAGCAGCAGGATGTAGGGAATATTTGATGTC
AGACTTTTGATAGCTGAACATGTTCTCGATAGTCGGTATTCATAACTTCGGAGCCAGAATGAGA
TTGTTGGAGGGCTTCTGGCTGTTGCTTGTAATGGAGCCAAAGGAATCTGCCCTCTCCCTAGGGA
CTGTGCTTGTTAGAGCCCTGTGGATCAAATCTCAAGGGGTCTCTGGCAGGGCAGGGGAGAGCAG
TGACTTCAACTGAGTCCCTGCCAATGGCTGAGCAAACAATATTTTGAAAACTGAAAGTCCCCAA
ATGGCAGCAGTTTATGTTCTGAACTGTTTGTGTTATATAGTGGGTTTTTTCCCCTCTTTGGAAC
TCTTGTGTTGTTAAAACAAGATGATTACTTTTTAATTAAAATGAGAAAGTCAGAACTC

hide sequence

RefSeq Acc Id:

XM_005392388 ⟹ XP_005392445

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955445	11,219,630 - 11,251,856 (+)	NCBI

Sequence:

show sequence

TTGCGACACCGCTGCGCCTGCCGCTGCGTGCGCGCCCTCTGCCCCTATCTCCACTCTACGCCCT
GGCCGCCATTGCCTCGTGCCCGCGCCGGTCGGTTGGTGGCGCCTTTGTCCTACGGCGGGCGGGT
GGGCTGAGGCGGAGGCTGCAGCGACAGGCCTGAGGCGAAGGAGTGGCCAGGAACCCGCCGCGCT
GGTAGCGTTCTCCATCTGATGTTCAGAAAGATCTTCAAATTGCATTCTCAAAGAAAAACTTACT
CCTGCCTCCAATTAACAGGAATTCAGAGGCTTTCCAAAAGATATTAATAAGGCAGCGGAAAGAA
GAAATATGAATACGGCTCCATCAAGACCCAGCCCCACACGAAGGGATCCATATGGCTTTGGAGA
CAGAGATACAAGGCGTGATCGATCTCCAATTCGAGGAAGTCCAAGGAGAGAATCCAGGGATGGC
AGAAATGGTCGGGATTCCCGGGATGGCAGAGACCTTCGAGACCCCCGAGACTTTCGGGAACACA
GAGACAGCAGAGACATGCGGGATCACAGAGACAGCAGAAGTTTTCGAGATACTCGAGACCTAAG
GGATTTTAGAGACTTTCGTGACCTAAGAGACTCTAGGGACTTTCGAGATCACCGGGACCCCATG
TATGACAGATACAGAGACATAAGAGACTCCCGAGACCCTATGTACAGGAGAGAGGGCTCTTATG
ACCGATACCTGCGGATGGATGACTATTGCAGGAGAAAGGATGACTCTTACTTTGACCGTTACAG
AGATGGCTTTGATGGGCGAGGCCCTCATGGCCCAGAAAGTCGTGCAAAAGAGCGTTTGAAACGT
GAGGAACGGCGTAGAGAAGAGCTTTATCGCCAATATTTTGAGGAAATCCAGAGACGCTTTGATG
CTGAAAGACCTGTGGATTGTTCTGTAATTGTGGTCAACAAGCAGACTAAAGATTATGCTGAATC
TGTGGGACGGAAGGTCCGGGACCTAGGCATGGTTGTGGATTTGATCTTCCTCAACACAGAGGTG
TCACTATCACAAGCCTTGGAGGATGTTAGCAGAGGAGGGTCTCCTTTTGCTATTGTCATCACCC
AGCAACACCAGATTCACCGTTCCTGTACAGTCAACATCATGTTTGGAACTCCACAAGAGCATCG
CAACATGCCCCAGGCAGATGCCATGGTGCTGGTGGCCAGAAATTATGAGCGTTACAAGAATGAG
TGCCGGGAGAAGGAACGTGAGGAGATTGCCAGACAGGCAGCCAAGATGGCTGATGAAGCCATCC
TACAGGAAAGAGAGCGAGGAGGCCCTGAGGAAGGAGTGCGTGGGGGTCACCCTCCAGCCATACA
AAGCCTCATCAACCTGCTGGCAGATAACAGGTACCTCACTGCTGAAGAGACAGACAAGATCATC
AACTACCTGCGAGAGCGAAAGGAGCGACTTATGAGGAGCAGCGCCGACTCTCTGCCTGGCCCGA
TTTCCCGCCAACCACTTGGGGCGACCTCGGGTGCCTCACTGAAGACACAGCCAAGCTCCCAGCC
ACTCCAGAGTGGCCAAGTGCTCCCTTCTGCTACACCCAGTCCAGCTGCACCCCCCACCTCCCAG
CAAGAGCTTCAGGCCAAAATCCTCAGTCTCTTCAACAGTGGCACTGTTGTGGCCAACAGCAGCT
CTGCATCACCCTCAGTTGCTTCCGGAAGCACCCAGAACCAGAATTTTTCCACAGCGGCAAACAG
CCAGCCTCAGCAAAGATCACAGGCCTCTGGCAACCAGCCTCCAAATATTTTGGGACAGGCAGGA
TCTGCTCGGAACCTGGGCCCCAGGCCTGGGGCTCCTTCCCAAGGGCTGTTTGGCCAGCCTTCCA
GTTGCCTAGCACCTGCTGGCAACATGGCTACCCAGAGGCCCGTGTCTTCCACAGGTATTAACTT
TGACAATCCAAGTGTACAGAAGGCTCTGGACACCCTGATCCAGAGTGGCCCTGCTCTCTCCCAC
CTGGTTAGCCAAACCTCAGCACAAGTGGGGCGGCCCCAGGCCCCCATGGGATCTTACCAGAGGC
ATTACTGAGGCTAAATCATTCAACTACTTCCAGTACCCTCATCCCCTGGCCTCCTTCTGCTTCA
TTCTAAATAGTTGTTTGGAGGATGTTCTTTGCGCTCTCCAGCTCTACATCAAATGTCGTAAGTT
TCTACCACCTGCTCTCCCTGCCCAAGGCCATATTGCTTGTTCCTTACAGAATCAGTTTATACTG
CATTTGGGGGAGTCTTGTTTTGGTTTTGGGTAGAAAATATCTCTTGGGTTGCTCAGGCAGTTCC
AGGTGTCTGGGCTCAGTTTGTGTTTGATGGGGTTTCTCTGGTCCCTCTGCTGGATTTGGAAAGA
AGCCGCATCCCAGTTGGCTGAGTTCGGAATGGCATTTTACGTGAACAGTGGCTACCACCTTTGT
TCATTTTGGGCCTACCAAGGCTTTCCCATTCGCACACATCTACCAGAGCTTGAACTCCTGACTA
GTTTCACAGAGGAGCAGCTGGACATGGCAGGCACAATGTCACCATGTCCCCTTCCCCTGAGTAT
GGGTCTCTGCTCAGGGACGCAGATCAGCTGTGATGGATTGGTGAAGAGTGACCATGGTGGCCCC
AGGAGGAGGAGCTATTTTGCCTGCATCGGAGTGGCATTTCTTGGAATTTTTTTTCTTCCATTTC
ACTGAAGGATCTCCAGTGGACTGAACAGCTCCAGTCACCAGTAGTTTGAAACAAACTGTGAATC
TGGGCCCTACCACTCTTCCCTTACAATATTTCTGTCAGCACCTCCCTCTCGTAAGCAGCACTTC
ATGGAGTCTGTTCTGAGAAAGCAGTCCTAGACTGATAGTGGATGCCCATCTCTTTTTCAGTGAT
TTGTTTTGAGTTTTTGACTCAAAAGCCCAGGCTTTTGTTTTCATCTGGACTCTTGTTCTGTTTT
CTGAGCAGCAGGATGTAGGGAATATTTGATGTCAGACTTTTGATAGCTGAACATGTTCTCGATA
GTCGGTATTCATAACTTCGGAGCCAGAATGAGATTGTTGGAGGGCTTCTGGCTGTTGCTTGTAA
TGGAGCCAAAGGAATCTGCCCTCTCCCTAGGGACTGTGCTTGTTAGAGCCCTGTGGATCAAATC
TCAAGGGGTCTCTGGCAGGGCAGGGGAGAGCAGTGACTTCAACTGAGTCCCTGCCAATGGCTGA
GCAAACAATATTTTGAAAACTGAAAGTCCCCAAATGGCAGCAGTTTATGTTCTGAACTGTTTGT
GTTATATAGTGGGTTTTTTCCCCTCTTTGGAACTCTTGTGTTGTTAAAACAAGATGATTACTTT
TTAATTAAAATGAGAAAGTCAGAACTC

hide sequence

RefSeq Acc Id:

XM_013518291 ⟹ XP_013373745

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955445	11,219,632 - 11,251,856 (+)	NCBI

Sequence:

show sequence

GCGACACCGCTGCGCCTGCCGCTGCGTGCGCGCCCTCTGCCCCTATCTCCACTCTACGCCCTGG
CCGCCATTGCCTCGTGCCCGCGCCGGTCGGTTGGTGGCGCCTTTGTCCTACGGCGGGCGGGTGG
GCTGAGGCGGAGGCTGCAGCGACAGGCCTGAGGCGAAGGAGTGGCCAGGAACCCGCCGCGCTGG
TAGCGGGATCCATATGGCTTTGGAGACAGAGATACAAGGCGTGATCGATCTCCAATTCGAGGAA
GTCCAAGGAGAGAATCCAGGGATGGCAGAAATGGTCGGGATTCCCGGGATGGCAGAGACCTTCG
AGACCCCCGAGACTTTCGGGAACACAGAGACAGCAGAGACATGCGGGATCACAGAGACAGCAGA
AGTTTTCGAGATACTCGAGACCTAAGGGATTTTAGAGACTTTCGTGACCTAAGAGACTCTAGGG
ACTTTCGAGATCACCGGGACCCCATGTATGACAGATACAGAGACATAAGAGACTCCCGAGACCC
TATGTACAGGAGAGAGGGCTCTTATGACCGATACCTGCGGATGGATGACTATTGCAGGAGAAAG
GATGACTCTTACTTTGACCGTTACAGAGATGGCTTTGATGGGCGAGGCCCTCATGGCCCAGAAA
GTCGTGCAAAAGAGCGTTTGAAACGTGAGGAACGGCGTAGAGAAGAGCTTTATCGCCAATATTT
TGAGGAAATCCAGAGACGCTTTGATGCTGAAAGACCTGTGGATTGTTCTGTAATTGTGGTCAAC
AAGCAGACTAAAGATTATGCTGAATCTGTGGGACGGAAGGTCCGGGACCTAGGCATGGTTGTGG
ATTTGATCTTCCTCAACACAGAGGTGTCACTATCACAAGCCTTGGAGGATGTTAGCAGAGGAGG
GTCTCCTTTTGCTATTGTCATCACCCAGCAACACCAGATTCACCGTTCCTGTACAGTCAACATC
ATGTTTGGAACTCCACAAGAGCATCGCAACATGCCCCAGGCAGATGCCATGGTGCTGGTGGCCA
GAAATTATGAGCGTTACAAGAATGAGTGCCGGGAGAAGGAACGTGAGGAGATTGCCAGACAGGC
AGCCAAGATGGCTGATGAAGCCATCCTACAGGAAAGAGAGCGAGGAGGCCCTGAGGAAGGAGTG
CGTGGGGGTCACCCTCCAGCCATACAAAGCCTCATCAACCTGCTGGCAGATAACAGGTACCTCA
CTGCTGAAGAGACAGACAAGATCATCAACTACCTGCGAGAGCGAAAGGAGCGACTTATGAGGAG
CAGCGCCGACTCTCTGCCTGGCCCGATTTCCCGCCAACCACTTGGGGCGACCTCGGGTGCCTCA
CTGAAGACACAGCCAAGCTCCCAGCCACTCCAGAGTGGCCAAGTGCTCCCTTCTGCTACACCCA
GTCCAGCTGCACCCCCCACCTCCCAGCAAGAGCTTCAGGCCAAAATCCTCAGTCTCTTCAACAG
TGGCACTGTTGTGGCCAACAGCAGCTCTGCATCACCCTCAGTTGCTTCCGGAAGCACCCAGAAC
CAGAATTTTTCCACAGCGGCAAACAGCCAGCCTCAGCAAAGATCACAGGCCTCTGGCAACCAGC
CTCCAAATATTTTGGGACAGGCAGGATCTGCTCGGAACCTGGGCCCCAGGCCTGGGGCTCCTTC
CCAAGGGCTGTTTGGCCAGCCTTCCAGTTGCCTAGCACCTGCTGGCAACATGGCTACCCAGAGG
CCCGTGTCTTCCACAGGTATTAACTTTGACAATCCAAGTGTACAGAAGGCTCTGGACACCCTGA
TCCAGAGTGGCCCTGCTCTCTCCCACCTGGTTAGCCAAACCTCAGCACAAGTGGGGCGGCCCCA
GGCCCCCATGGGATCTTACCAGAGGCATTACTGAGGCTAAATCATTCAACTACTTCCAGTACCC
TCATCCCCTGGCCTCCTTCTGCTTCATTCTAAATAGTTGTTTGGAGGATGTTCTTTGCGCTCTC
CAGCTCTACATCAAATGTCGTAAGTTTCTACCACCTGCTCTCCCTGCCCAAGGCCATATTGCTT
GTTCCTTACAGAATCAGTTTATACTGCATTTGGGGGAGTCTTGTTTTGGTTTTGGGTAGAAAAT
ATCTCTTGGGTTGCTCAGGCAGTTCCAGGTGTCTGGGCTCAGTTTGTGTTTGATGGGGTTTCTC
TGGTCCCTCTGCTGGATTTGGAAAGAAGCCGCATCCCAGTTGGCTGAGTTCGGAATGGCATTTT
ACGTGAACAGTGGCTACCACCTTTGTTCATTTTGGGCCTACCAAGGCTTTCCCATTCGCACACA
TCTACCAGAGCTTGAACTCCTGACTAGTTTCACAGAGGAGCAGCTGGACATGGCAGGCACAATG
TCACCATGTCCCCTTCCCCTGAGTATGGGTCTCTGCTCAGGGACGCAGATCAGCTGTGATGGAT
TGGTGAAGAGTGACCATGGTGGCCCCAGGAGGAGGAGCTATTTTGCCTGCATCGGAGTGGCATT
TCTTGGAATTTTTTTTCTTCCATTTCACTGAAGGATCTCCAGTGGACTGAACAGCTCCAGTCAC
CAGTAGTTTGAAACAAACTGTGAATCTGGGCCCTACCACTCTTCCCTTACAATATTTCTGTCAG
CACCTCCCTCTCGTAAGCAGCACTTCATGGAGTCTGTTCTGAGAAAGCAGTCCTAGACTGATAG
TGGATGCCCATCTCTTTTTCAGTGATTTGTTTTGAGTTTTTGACTCAAAAGCCCAGGCTTTTGT
TTTCATCTGGACTCTTGTTCTGTTTTCTGAGCAGCAGGATGTAGGGAATATTTGATGTCAGACT
TTTGATAGCTGAACATGTTCTCGATAGTCGGTATTCATAACTTCGGAGCCAGAATGAGATTGTT
GGAGGGCTTCTGGCTGTTGCTTGTAATGGAGCCAAAGGAATCTGCCCTCTCCCTAGGGACTGTG
CTTGTTAGAGCCCTGTGGATCAAATCTCAAGGGGTCTCTGGCAGGGCAGGGGAGAGCAGTGACT
TCAACTGAGTCCCTGCCAATGGCTGAGCAAACAATATTTTGAAAACTGAAAGTCCCCAAATGGC
AGCAGTTTATGTTCTGAACTGTTTGTGTTATATAGTGGGTTTTTTCCCCTCTTTGGAACTCTTG
TGTTGTTAAAACAAGATGATTACTTTTTAATTAAAATGAGAAAGTCAGAACTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005392444	(Get FASTA)	NCBI Sequence Viewer
	XP_005392445	(Get FASTA)	NCBI Sequence Viewer
	XP_013373745	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000010601
	ENSCLAP00000010601.1

RefSeq Acc Id:	XP_005392445 ⟸ XM_005392388
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V909 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNTAPSRPSPTRRDPYGFGDRDTRRDRSPIRGSPRRESRDGRNGRDSRDGRDLRDPRDFREHRD SRDMRDHRDSRSFRDTRDLRDFRDFRDLRDSRDFRDHRDPMYDRYRDIRDSRDPMYRREGSYDR YLRMDDYCRRKDDSYFDRYRDGFDGRGPHGPESRAKERLKREERRREELYRQYFEEIQRRFDAE RPVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQ HQIHRSCTVNIMFGTPQEHRNMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQ ERERGGPEEGVRGGHPPAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSADSLPGPIS RQPLGATSGASLKTQPSSQPLQSGQVLPSATPSPAAPPTSQQELQAKILSLFNSGTVVANSSSA SPSVASGSTQNQNFSTAANSQPQQRSQASGNQPPNILGQAGSARNLGPRPGAPSQGLFGQPSSC LAPAGNMATQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTSAQVGRPQAPMGSYQRHY hide sequence

RefSeq Acc Id:	XP_005392444 ⟸ XM_005392387
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V909 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNTAPSRPSPTRRDPYGFGDRDTRRDRSPIRGSPRRESRDGRNGRDSRDGRDLRDPRDFREHRD SRDMRDHRDSRSFRDTRDLRDFRDFRDLRDSRDFRDHRDPMYDRYRDIRDSRDPMYRREGSYDR YLRMDDYCRRKDDSYFDRYRDGFDGRGPHGPESRAKERLKREERRREELYRQYFEEIQRRFDAE RPVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQ HQIHRSCTVNIMFGTPQEHRNMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQ ERERGGPEEGVRGGHPPAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSADSLPGPIS RQPLGATSGASLKTQPSSQPLQSGQVLPSATPSPAAPPTSQQELQAKILSLFNSGTVVANSSSA SPSVASGSTQNQNFSTAANSQPQQRSQASGNQPPNILGQAGSARNLGPRPGAPSQGLFGQPSSC LAPAGNMATQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTSAQVGRPQAPMGSYQRHY hide sequence

RefSeq Acc Id:

XP_013373745 ⟸ XM_013518291

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRDHRDSRSFRDTRDLRDFRDFRDLRDSRDFRDHRDPMYDRYRDIRDSRDPMYRREGSYDRYLR
MDDYCRRKDDSYFDRYRDGFDGRGPHGPESRAKERLKREERRREELYRQYFEEIQRRFDAERPV
DCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQI
HRSCTVNIMFGTPQEHRNMPQADAMVLVARNYERYKNECREKEREEIARQAAKMADEAILQERE
RGGPEEGVRGGHPPAIQSLINLLADNRYLTAEETDKIINYLRERKERLMRSSADSLPGPISRQP
LGATSGASLKTQPSSQPLQSGQVLPSATPSPAAPPTSQQELQAKILSLFNSGTVVANSSSASPS
VASGSTQNQNFSTAANSQPQQRSQASGNQPPNILGQAGSARNLGPRPGAPSQGLFGQPSSCLAP
AGNMATQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTSAQVGRPQAPMGSYQRHY

hide sequence

Ensembl Acc Id:

ENSCLAP00000010601 ⟸ ENSCLAT00000010733

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000007316	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000010733	ENTREZGENE
	ENSCLAT00000010733.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.800	UniProtKB/TrEMBL
InterPro	Anticodon-bd_dom_sf	UniProtKB/TrEMBL
	Nuc_rcpt_coact/corep	UniProtKB/TrEMBL
NCBI Gene	Ncoa5	ENTREZGENE
PANTHER	NUCLEAR RECEPTOR COACTIVATOR 5	UniProtKB/TrEMBL
	NUCLEAR RECEPTOR COACTIVATOR 5-RELATED	UniProtKB/TrEMBL
Superfamily-SCOP	Class II aaRS ABD-related	UniProtKB/TrEMBL
UniProt	A0A8C2V909	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar