LOC100911239 (uncharacterized LOC100911239) - Rat Genome Database

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Gene: LOC100911239 (uncharacterized LOC100911239) Rattus norvegicus
Analyze
Symbol: LOC100911239
Name: uncharacterized LOC100911239
RGD ID: 6494480
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81311,523,449 - 11,545,565 (-)NCBIGRCr8
mRatBN7.21311,010,980 - 11,026,384 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01313,311,809 - 13,331,500 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01318,548,802 - 18,562,049 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1311,043,477 - 11,063,869 (-)NCBICelera
Cytogenetic Map13p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2317027Aia22Adjuvant induced arthritis QTL 222.29joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)13134785618Rat
631672Iddm12Insulin dependent diabetes mellitus QTL 122.20.0032blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)13600200837088115Rat
2303030Bp327Blood pressure QTL 327arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)13143736554Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13742179187286911Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1311081740103588154Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13600200847359539Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13600200888706694Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131103588154Rat
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13134785618Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_358814
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81311,523,449 - 11,545,565 (-)NCBI
mRatBN7.21311,010,980 - 11,026,384 (-)NCBI
Rnor_6.01313,311,809 - 13,331,500 (-)NCBI
Rnor_5.01318,548,802 - 18,562,049 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-18683 BioCyc
NCBI Gene LOC100911239 ENTREZGENE
PhenoGen LOC100911239 PhenoGen
RNAcentral URS0000CCF310 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-07-05 LOC100911239  uncharacterized LOC100911239      Symbol and Name status set to provisional 70820 PROVISIONAL