Gm15667 (predicted gene 15667) - Rat Genome Database

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Gene: Gm15667 (predicted gene 15667) Mus musculus
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Symbol: Gm15667
Name: predicted gene 15667
RGD ID: 5146952
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Tra2b  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,526,163 - 30,527,357 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,526,336 - 30,527,117 (+)EnsemblGRCm39 Ensembl
GRCm381430,804,206 - 30,805,400 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1430,804,379 - 30,805,160 (+)EnsemblGRCm38mm10GRCm38
MGSCv371431,617,545 - 31,618,386 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1427,061,363 - 27,062,204 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.09NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm15667
31 total Variants

Predicted Target Of
Summary Value
Count of predictions:63
Count of miRNA genes:62
Interacting mature miRNAs:63
Transcripts:ENSMUST00000118107
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 19 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse

1 to 10 of 19 rows





RefSeq Transcripts NG_019987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000227272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1430,526,336 - 30,527,117 (+)Ensembl
GRCm38.p6 Ensembl1430,804,379 - 30,805,160 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000115370 Ensembl
MGD MGI:3783109 ENTREZGENE
NCBI Gene 100417801 ENTREZGENE
PhenoGen Gm15667 PhenoGen