Gm18142 (predicted gene, 18142) - Rat Genome Database

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Gene: Gm18142 (predicted gene, 18142) Mus musculus
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Symbol: Gm18142
Name: predicted gene, 18142
RGD ID: 5143419
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Hdac1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39147,427,588 - 7,428,958 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl147,427,594 - 7,428,956 (+)EnsemblGRCm39 Ensembl
GRCm381415,040,805 - 15,042,175 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1415,040,807 - 15,042,169 (-)EnsemblGRCm38mm10GRCm38
MGSCv371415,873,319 - 15,874,689 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1410,709,548 - 10,710,921 (-)NCBICelera
Cytogenetic Map14A1NCBI
cM Map147.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm18142
11 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141550Dbm3_mdiabetes modifier 3 (mouse)Not determined514347339143596Mouse
1301991Wta3_mweight adult 3 (mouse)Not determined14388747337887650Mouse
11532711Sluc40_msusceptibility to lung cancer 40 (mouse)14127379943Mouse
10412071Ssen3_msuseptibility to Sendai virus 3 (mouse)Not determined14126987934Mouse
13824988Phsq1_mpercent hyperactivated sperm QTL 1 (mouse)14305000119469772Mouse
4141265Appd2_mAPP associated premature death 2 (mouse)Not determined14594555230114862Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_019878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC117608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000224124
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl147,427,594 - 7,428,956 (+)Ensembl
GRCm38.p6 Ensembl1415,040,807 - 15,042,169 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000114542 Ensembl, ENTREZGENE
MGD MGI:5010327 ENTREZGENE
NCBI Gene 100416520 ENTREZGENE
PhenoGen Gm18142 PhenoGen