SNX18P15 (sorting nexin 18 pseudogene 15) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: SNX18P15 (sorting nexin 18 pseudogene 15) Homo sapiens
Analyze
Symbol: SNX18P15
Name: sorting nexin 18 pseudogene 15
RGD ID: 5128978
HGNC Page HGNC:39623
Description:
Type: pseudo
RefSeq Status: INFERRED
Related Functional Gene: SNX18  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh371142,659,810 - 142,660,763 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map1q21.1NCBI
CHM1_11143,527,631 - 143,528,384 (-)NCBICHM1_1
T2T-CHM13v2.0449,411,547 - 49,412,500 (+)NCBIT2T-CHM13v2.0


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:60
Count of miRNA genes:58
Interacting mature miRNAs:60
Transcripts:ENST00000434482
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC SNX18P15 COSMIC
GTEx SNX18P15 GTEx
HGNC ID HGNC:39623 ENTREZGENE
Human Proteome Map SNX18P15 Human Proteome Map
NCBI Gene 100419019 ENTREZGENE