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Gene: GLYATL1B (glycine-N-acyltransferase like 1B) Homo sapiens

Analyze

No known orthologs.

Symbol:

GLYATL1B

Name:

glycine-N-acyltransferase like 1B

RGD ID:

4144680

HGNC Page

HGNC:37865

Description:

Predicted to enable glutamine N-acyltransferase activity. Predicted to be involved in glutamine metabolic process. Predicted to be located in mitochondrion.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

GLYATL1P3; glycine-N-acyltransferase like 1 pseudogene 3; putative glycine N-acyltransferase-like protein 1B

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Other homologs ²				less info ...
Sus scrofa (pig):	GLYATL2 (glycine-N-acyltransferase like 2)	HGNC	OrthoDB
Alliance orthologs ³
Danio rerio (zebrafish):	si:dkey-76k16.6	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	si:ch73-106k19.2	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-76k16.5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG12560	Alliance	DIOPT (Hieranoid\|InParanoid\|SonicParanoid)
Caenorhabditis elegans (roundworm):	T10B10.4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	Glyat	Alliance	DIOPT (Hieranoid\|InParanoid\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F43H9.4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	59,086,307 - 59,094,786 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	59,086,307 - 59,094,786 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	58,853,780 - 58,862,259 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Celera	11	56,212,597 - 56,233,508 (+)	NCBI		Celera
Cytogenetic Map	11	q12.1	NCBI
HuRef	11	55,198,653 - 55,209,531 (+)	NCBI		HuRef
CHM1_1	11	58,719,272 - 58,727,798 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	59,035,481 - 59,043,960 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

glutamine metabolic process (IBA)

Cellular Component

mitochondrion (IEA)

Molecular Function

acyltransferase activity (IEA)

glutamine N-acyltransferase activity (IBA,IEA)

glycine N-acyltransferase activity (IEA)

References

Additional References at PubMed

PMID:21873635

Genomics

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	84
Count of miRNA genes:	83
Interacting mature miRNAs:	84
Transcripts:	ENST00000527482
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system
109	559	465	142	1114	412	818	351	1065	203	922	1903	1469	8	288	350	715	425	153

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001355566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AP001258	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000527482 ⟹ ENSP00000488958

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	11	59,086,307 - 59,094,786 (+)	Ensembl

RefSeq Acc Id:

NM_001355566 ⟹ NP_001342495

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	11	59,086,307 - 59,094,786 (+)	NCBI
T2T-CHM13v2.0	11	59,035,481 - 59,043,960 (+)	NCBI

Sequence:

show sequence

ATGATTCTATTGAATAATTCCGAGCGGCTGCTGGCCCTATTCAAATCTTTAGCAAGGAGCATTC
CTGAGTCCCTGAAGGTGTATGGCTCTCTGTTTCACATCAATCACGGGAACCCCTTCAACATGGA
AGTGTTGGTGGACTCCTGGCCCGAGTATCAGATGGTTATTATCCGACCTCAAAAACAGGAGATG
ACTGATGACATGGATTCATACACTAATGTATATCGTGTATTCTCCAAAGACCCTCAAAAATCAC
AAGAAGTTTTGAAAAATTCTGAGATCATAAACTGGAAACAGAAACTCCAAATCCAAGGTTTTCA
AGAAAGTTTAGGTGAGGGGATAAGAGCAGCTGCATTTTCAAATTCAGTGAAGGTAGAGCATTCG
AGAGCACTCCTCTTTGTTACGGAAGATATCCTGAAGCTCTATGCCACCAATAAAAGCAAGCTTG
GAAGCTGGGCTGAGACAGGCCACCCAGATGACGAATTGGAGAGCGAGACTCCGAACTTTAAGTA
TGCCCAGCTGAATGTGTCTTATTCTGGGCTGGTAAATGACAACTGGAAGCTAGGGATGAATAAG
AGGAGCCTGCGTTACATCAAGCGCTGCCTAGGAGCCCTGCCAGCAGCCTGTATGCTGGGCCCAG
AGGGGGTCCCGGTCTCATGGGTAACCATGGACCCTTCTTGTGAAATAGGAATGGGCTACAGTGT
GGAAAAATACCGAAGGAGAGGCAATGGGACACGGCTGATCATGCGATGCATGAAGTATCTGTGT
CAGAAGAATATTCCATTTTACGGCTCTGTGCTGGAAGAAAATCAAGGCGTCATCAGAAAGACTA
GTGCACTAGGTTTCCTTGAGGCCTCCTGTCAGTGGCACCAATGGAACTGCTACCCACAGAATCT
TGTTCCATTGTAG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001342495	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	A0A0U1RQE8	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000488958
	ENSP00000488958.1

RefSeq Acc Id:

NP_001342495 ⟸ NM_001355566

- UniProtKB:

A0A0U1RQE8 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MILLNNSERLLALFKSLARSIPESLKVYGSLFHINHGNPFNMEVLVDSWPEYQMVIIRPQKQEM
TDDMDSYTNVYRVFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIRAAAFSNSVKVEHS
RALLFVTEDILKLYATNKSKLGSWAETGHPDDELESETPNFKYAQLNVSYSGLVNDNWKLGMNK
RSLRYIKRCLGALPAACMLGPEGVPVSWVTMDPSCEIGMGYSVEKYRRRGNGTRLIMRCMKYLC
QKNIPFYGSVLEENQGVIRKTSALGFLEASCQWHQWNCYPQNLVPL

hide sequence

Ensembl Acc Id:

ENSP00000488958 ⟸ ENST00000527482

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0U1RQE8-F1-model_v2	AlphaFold	A0A0U1RQE8	1-302	view protein structure

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:37865	AgrOrtholog
COSMIC	GLYATL1B	COSMIC
Ensembl Genes	ENSG00000255151	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000527482	ENTREZGENE
	ENST00000527482.2	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.630.30	UniProtKB/Swiss-Prot
GTEx	ENSG00000255151	GTEx
HGNC ID	HGNC:37865	ENTREZGENE
Human Proteome Map	GLYATL1B	Human Proteome Map
InterPro	Acyl_CoA_acyltransferase	UniProtKB/Swiss-Prot
	Glycine_N-acyltransferase	UniProtKB/Swiss-Prot
	Glycine_N-acyltransferase_C	UniProtKB/Swiss-Prot
	Glycine_N-acyltransferase_N	UniProtKB/Swiss-Prot
NCBI Gene	100287520	ENTREZGENE
PANTHER	GLYCINE N-ACYLTRANSFERASE-LIKE PROTEIN 1B-RELATED	UniProtKB/Swiss-Prot
	PTHR15298	UniProtKB/Swiss-Prot
Pfam	Gly_acyl_tr_C	UniProtKB/Swiss-Prot
	Gly_acyl_tr_N	UniProtKB/Swiss-Prot
PharmGKB	PA166181532	PharmGKB
Superfamily-SCOP	SSF55729	UniProtKB/Swiss-Prot
UniProt	A0A0U1RQE8	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-10-04	GLYATL1B	glycine-N-acyltransferase like 1B	GLYATL1P3	glycine-N-acyltransferase like 1 pseudogene 3	Symbol and/or name change	5135510	APPROVED
2015-11-24	GLYATL1P3	glycine-N-acyltransferase like 1 pseudogene 3		glycine-N-acyltransferase-like 1 pseudogene 3	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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