MIR3192 (microRNA 3192) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: MIR3192 (microRNA 3192) Homo sapiens
Analyze
Symbol: MIR3192
Name: microRNA 3192
RGD ID: 4109031
HGNC Page HGNC:38202
Description: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: mir-3192
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382018,470,615 - 18,470,691 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2018,470,615 - 18,470,691 (+)EnsemblGRCh38hg38GRCh38
GRCh372018,451,259 - 18,451,335 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera2018,525,348 - 18,525,424 (+)NCBICelera
Cytogenetic Map20p11.23NCBI
HuRef2018,413,337 - 18,413,413 (+)NCBIHuRef
CHM1_12018,451,296 - 18,451,372 (+)NCBICHM1_1
T2T-CHM13v2.02018,521,715 - 18,521,791 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MIR3192Humansodium arsenite decreases expressionEXP 6480464sodium arsenite results in decreased expression of MIR3192 mRNACTDPMID:34032870

PMID:16381832   PMID:20300190   PMID:21037258   PMID:21199797   PMID:23034410  



.

Predicted Targets
Summary Value
Count of predictions:66655
Count of gene targets:19495
Count of transcripts:45786
Interacting mature miRNAs:hsa-miR-3192-3p, hsa-miR-3192-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Microtar, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643385BW311_HBody weight QTL 311 (human)3.310.0001Body fat amount20734547523289549Human
1643383BW312_HBody weight QTL 312 (human)2.920.0004Body fat amountpercent fat20734547523289549Human




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
26 187 56 39 387 183 433 3 110 439 109 259 864 560 51 176 164 237 306 12



Ensembl Acc Id: ENST00000584920
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2018,470,615 - 18,470,691 (+)Ensembl
RefSeq Acc Id: NR_036160
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382018,470,615 - 18,470,691 (+)NCBI
GRCh372018,451,259 - 18,451,335 (+)RGD
Celera2018,525,348 - 18,525,424 (+)RGD
HuRef2018,413,337 - 18,413,413 (+)RGD
CHM1_12018,451,296 - 18,451,372 (+)NCBI
T2T-CHM13v2.02018,521,715 - 18,521,791 (+)NCBI
Sequence:


1 to 12 of 12 rows
Database
Acc Id
Source(s)
COSMIC MIR3192 COSMIC
Ensembl Genes ENSG00000265137 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000584920 ENTREZGENE
GTEx ENSG00000265137 GTEx
HGNC ID HGNC:38202 ENTREZGENE
Human Proteome Map MIR3192 Human Proteome Map
miRBase MI0014237 ENTREZGENE
NCBI Gene 100422875 ENTREZGENE
PharmGKB PA165392396 PharmGKB
RNAcentral URS00000AB32B RNACentral
  URS000075AD8F RNACentral
  URS000075D74E RNACentral
1 to 12 of 12 rows