LOC119866150 (disintegrin and metalloproteinase domain-containing protein 1a-like) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: LOC119866150 (disintegrin and metalloproteinase domain-containing protein 1a-like) Canis lupus familiaris
Analyze
Symbol: LOC119866150
Name: disintegrin and metalloproteinase domain-containing protein 1a-like
RGD ID: 40920525
Description: ENCODES a protein that exhibits metal ion binding (inferred); metalloendopeptidase activity (inferred); INVOLVED IN binding of sperm to zona pellucida (inferred); male gonad development (inferred); proteolysis (inferred); FOUND IN external side of plasma membrane (inferred); membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ROS_Cfam_1.0269,682,821 - 9,686,000 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1269,638,077 - 9,664,424 (+)NCBIUMICH_Zoey_3.1
UU_Cfam_GSD_1.0269,677,009 - 9,701,736 (+)NCBIUU_Cfam_GSD_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038436712   ⟹   XP_038292640
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0269,682,821 - 9,686,000 (+)NCBI
RefSeq Acc Id: XM_038511628   ⟹   XP_038367556
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,661,056 - 9,664,407 (+)NCBI
RefSeq Acc Id: XM_038511629   ⟹   XP_038367557
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,638,084 - 9,664,407 (+)NCBI
RefSeq Acc Id: XM_038511630   ⟹   XP_038367558
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1269,638,077 - 9,664,424 (+)NCBI
RefSeq Acc Id: XM_038575117   ⟹   XP_038431045
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,677,015 - 9,701,736 (+)NCBI
RefSeq Acc Id: XM_038575118   ⟹   XP_038431046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0269,677,009 - 9,701,736 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038367558   ⟸   XM_038511630
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038367557   ⟸   XM_038511629
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038367556   ⟸   XM_038511628
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038292640   ⟸   XM_038436712
- Peptide Label: isoform X1
- UniProtKB: A0A8I3S462 (UniProtKB/TrEMBL),   A0A8C0TH04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431046   ⟸   XM_038575118
- Peptide Label: isoform X6
- UniProtKB: A0A8C0TH04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431045   ⟸   XM_038575117
- Peptide Label: isoform X5
- UniProtKB: A0A8C0TH04 (UniProtKB/TrEMBL)
Protein Domains
Disintegrin   EGF-like   Peptidase M12B


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00040022038 UniProtKB/TrEMBL
  ENSCAFG00845019874 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00040040900.1 UniProtKB/TrEMBL
  ENSCAFT00845035002 ENTREZGENE
  ENSCAFT00845035002.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.390.10 UniProtKB/TrEMBL
  4.10.70.10 UniProtKB/TrEMBL
InterPro ADAM_Cys-rich UniProtKB/TrEMBL
  Disintegrin_CS UniProtKB/TrEMBL
  Disintegrin_dom UniProtKB/TrEMBL
  Disintegrin_dom_sf UniProtKB/TrEMBL
  EGF-like_dom UniProtKB/TrEMBL
  MetalloPept_cat_dom_sf UniProtKB/TrEMBL
  Peptidase_M12B UniProtKB/TrEMBL
  Peptidase_M12B_N UniProtKB/TrEMBL
  Reprolysin_adamalysin UniProtKB/TrEMBL
NCBI Gene LOC119866150 ENTREZGENE
PANTHER ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN UniProtKB/TrEMBL
  DISINTEGRIN AND METALLOPROTEINASE DOMAIN-CONTAINING PROTEIN 1A-RELATED UniProtKB/TrEMBL
Pfam ADAM_CR UniProtKB/TrEMBL
  Disintegrin UniProtKB/TrEMBL
  Pep_M12B_propep UniProtKB/TrEMBL
  Reprolysin UniProtKB/TrEMBL
PRINTS DISINTEGRIN UniProtKB/TrEMBL
PROSITE ADAM_MEPRO UniProtKB/TrEMBL
  DISINTEGRIN_1 UniProtKB/TrEMBL
  DISINTEGRIN_2 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
SMART ACR UniProtKB/TrEMBL
  DISIN UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF57552 UniProtKB/TrEMBL
UniProt A0A8C0TH04 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S462 ENTREZGENE, UniProtKB/TrEMBL