LOC119867567 (small nucleolar RNA SNORA63) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: LOC119867567 (small nucleolar RNA SNORA63) Canis lupus familiaris
Analyze
Symbol: LOC119867567 (Ensembl: SNORA63)
Name: small nucleolar RNA SNORA63
RGD ID: 40909681
Description: ASSOCIATED WITH Currarino syndrome (ortholog)
Type: snorna
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3420,484,339 - 20,484,469 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03416,303,994 - 16,304,124 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3416,303,994 - 16,304,124 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13416,343,573 - 16,343,703 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03416,329,158 - 16,329,288 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03416,567,540 - 16,567,670 (+)NCBIUU_Cfam_GSD_1.0


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
LOC119867567
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3420,484,339 - 20,484,469 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03416,303,994 - 16,304,124 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3416,303,994 - 16,304,124 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13416,343,573 - 16,343,703 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03416,329,158 - 16,329,288 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03416,567,540 - 16,567,670 (+)NCBIUU_Cfam_GSD_1.0
SNORA63D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383183,451,859 - 183,451,990 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3183,451,857 - 183,451,988 (+)EnsemblGRCh38hg38GRCh38
GRCh373183,169,647 - 183,169,778 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map3q27.1NCBI
T2T-CHM13v2.03186,259,280 - 186,259,411 (+)NCBIT2T-CHM13v2.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00845039704
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3416,303,994 - 16,304,124 (+)Ensembl
RefSeq Acc Id: XR_005307142
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03416,303,994 - 16,304,124 (+)NCBI
RefSeq Acc Id: XR_005317758
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3420,484,339 - 20,484,469 (+)NCBI
RefSeq Acc Id: XR_005350208
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13416,343,573 - 16,343,703 (+)NCBI
RefSeq Acc Id: XR_005384084
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03416,567,540 - 16,567,670 (+)NCBI
RefSeq Acc Id: XR_005417775
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03416,329,158 - 16,329,288 (+)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845022497 Ensembl, ENTREZGENE
Ensembl Transcript ENSCAFT00845039704 ENTREZGENE
NCBI Gene LOC119867567 ENTREZGENE