LOC134482489 (elongin-C-like) - Rat Genome Database

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Gene: LOC134482489 (elongin-C-like) Rattus norvegicus
Analyze
Symbol: LOC134482489
Name: elongin-C-like
RGD ID: 402208555
Description: INVOLVED IN ubiquitin-dependent protein catabolic process (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81622,414,747 - 22,415,199 (+)NCBIGRCr8


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_063275958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_063275958   ⟹   XP_063132028
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81622,414,747 - 22,415,199 (+)NCBI
Protein Sequences
Protein RefSeqs XP_063132028 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000067410.2
RefSeq Acc Id: XP_063132028   ⟸   XM_063275958
- UniProtKB: A0A8L2UP21 (UniProtKB/TrEMBL)
Protein Domains
SKP1 component POZ

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000031730 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000050236.5 UniProtKB/TrEMBL
InterPro ELC1 UniProtKB/TrEMBL
  SKP1-like UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/TrEMBL
  Skp1_comp_POZ UniProtKB/TrEMBL
NCBI Gene LOC134482489 ENTREZGENE
PANTHER ELONGIN-C UniProtKB/TrEMBL
  ELONGIN-C UniProtKB/TrEMBL
Pfam Skp1_POZ UniProtKB/TrEMBL
PhenoGen LOC134482489 PhenoGen
RatGTEx ENSRNOG00000031730 RatGTEx
SMART Skp1 UniProtKB/TrEMBL
Superfamily-SCOP POZ domain UniProtKB/TrEMBL
UniProt A0A8L2UP21 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-05 LOC134482489  elongin-C-like      Symbol and Name status set to provisional 70820 PROVISIONAL