LOC134478921 (uncharacterized LOC134478921) - Rat Genome Database

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Gene: LOC134478921 (uncharacterized LOC134478921) Rattus norvegicus
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Symbol: LOC134478921
Name: uncharacterized LOC134478921
RGD ID: 402205789
Description: INVOLVED IN regulation of Rho protein signal transduction (inferred); signal transduction (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein LOC134478921
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82133,686,249 - 133,735,909 (+)NCBIGRCr8
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134478921Ratregulation of Rho protein signal transduction involved_inIEAInterPro:IPR0478861600115GO_REF:0000002InterProGO_REF:0000002
LOC134478921Ratsignal transduction involved_inIEAInterPro:IPR0001981600115GO_REF:0000002InterProGO_REF:0000002

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134478921RatGTPase activator activity enablesIBAFB:FBgn0036518 and PANTHER:PTN0005717691600115GO_REF:0000033GO_CentralGO_REF:0000033



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RefSeq Transcripts XM_063282875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063282876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_063282875   ⟹   XP_063138945
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82133,686,255 - 133,735,903 (+)NCBI
RefSeq Acc Id: XM_063282876   ⟹   XP_063138946
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82133,686,249 - 133,735,909 (+)NCBI
Protein RefSeqs XP_063138945 (Get FASTA)   NCBI Sequence Viewer  
  XP_063138946 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000082944.1
RefSeq Acc Id: XP_063138946   ⟸   XM_063282876
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZY49 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063138945   ⟸   XM_063282875
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZY49 (UniProtKB/TrEMBL)
Rho-GAP


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 21 of 21 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSRNOG00000069216 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000102794.1 UniProtKB/TrEMBL
Gene3D-CATH Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) UniProtKB/TrEMBL
  Rho GTPase activation protein UniProtKB/TrEMBL
InterPro ARHGAP20-like_RhoGAP UniProtKB/TrEMBL
  ARHGAP20_PH UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/TrEMBL
  RhoGAP_dom UniProtKB/TrEMBL
NCBI Gene LOC134478921 ENTREZGENE
PANTHER GENE 1527-RELATED UniProtKB/TrEMBL
  T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED UniProtKB/TrEMBL
Pfam RHG20_PH UniProtKB/TrEMBL
  RhoGAP UniProtKB/TrEMBL
PhenoGen LOC134478921 PhenoGen
PROSITE RHOGAP UniProtKB/TrEMBL
RatGTEx ENSRNOG00000069216 RatGTEx
SMART RhoGAP UniProtKB/TrEMBL
Superfamily-SCOP GTPase activation domain, GAP UniProtKB/TrEMBL
  PH domain-like UniProtKB/TrEMBL
UniProt A0A8I5ZY49 ENTREZGENE, UniProtKB/TrEMBL
1 to 21 of 21 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-05 LOC134478921  uncharacterized LOC134478921      Symbol and Name status set to provisional 70820 PROVISIONAL