LOC134478921 (uncharacterized LOC134478921) - Rat Genome Database
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Nomenclature History
Gene: LOC134478921 (uncharacterized LOC134478921) Rattus norvegicus
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Analyze
General
Array IDs
Symbol:
LOC134478921
Name:
uncharacterized LOC134478921
RGD ID:
402205789
Description:
INVOLVED IN regulation of Rho protein signal transduction (inferred); signal transduction (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
uncharacterized protein LOC134478921
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCr8
2
133,686,249 - 133,735,909 (+)
NCBI
GRCr8
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
Gene Ontology Annotations
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Biological Process
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134478921
Rat
regulation of Rho protein signal transduction
involved_in
IEA
InterPro:IPR047886
1600115
GO_REF:0000002
InterPro
GO_REF:0000002
LOC134478921
Rat
signal transduction
involved_in
IEA
InterPro:IPR000198
1600115
GO_REF:0000002
InterPro
GO_REF:0000002
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Molecular Function
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Only show annotations with direct experimental evidence (0 objects hidden)
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134478921
Rat
GTPase activator activity
enables
IBA
FB:FBgn0036518
and
PANTHER:PTN000571769
1600115
GO_REF:0000033
GO_Central
GO_REF:0000033
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Gene Ontology Annotations
Click to see Annotation Summary View
Biological Process
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regulation of Rho protein signal transduction
(IEA)
signal transduction
(IEA)
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Molecular Function
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GTPase activator activity
(IBA)
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References
Genomics
.
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
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Sequence
Nucleotide Sequences
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RefSeq Transcripts
XM_063282875
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
XM_063282876
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
GenBank Nucleotide
JAXUCZ010000002
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
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Reference Sequences
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RefSeq Acc Id:
XM_063282875 ⟹ XP_063138945
Type:
CODING
Position:
Rat Assembly
Chr
Position (strand)
Source
GRCr8
2
133,686,255 - 133,735,903 (+)
NCBI
RefSeq Acc Id:
XM_063282876 ⟹ XP_063138946
Type:
CODING
Position:
Rat Assembly
Chr
Position (strand)
Source
GRCr8
2
133,686,249 - 133,735,909 (+)
NCBI
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Protein Sequences
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Protein RefSeqs
XP_063138945
(Get FASTA)
NCBI Sequence Viewer
XP_063138946
(Get FASTA)
NCBI Sequence Viewer
Ensembl Protein
ENSRNOP00000082944.1
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Reference Protein Sequences
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RefSeq Acc Id:
XP_063138946 ⟸ XM_063282876
- Peptide Label:
isoform X2
- UniProtKB:
A0A8I5ZY49
(UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_063138945 ⟸ XM_063282875
- Peptide Label:
isoform X1
- UniProtKB:
A0A8I5ZY49
(UniProtKB/TrEMBL)
Protein Domains
Rho-GAP
Transcriptome
eQTL
View at Phenogen
WGCNA
View at Phenogen
Tissue/Strain Expression
View at Phenogen
Additional Information
External Database Links
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Database
Acc Id
Source(s)
Ensembl Genes
ENSRNOG00000069216
UniProtKB/TrEMBL
Ensembl Transcript
ENSRNOT00000102794.1
UniProtKB/TrEMBL
Gene3D-CATH
Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)
UniProtKB/TrEMBL
Rho GTPase activation protein
UniProtKB/TrEMBL
InterPro
ARHGAP20-like_RhoGAP
UniProtKB/TrEMBL
ARHGAP20_PH
UniProtKB/TrEMBL
PH-like_dom_sf
UniProtKB/TrEMBL
Rho_GTPase_activation_prot
UniProtKB/TrEMBL
RhoGAP_dom
UniProtKB/TrEMBL
NCBI Gene
LOC134478921
ENTREZGENE
PANTHER
GENE 1527-RELATED
UniProtKB/TrEMBL
T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED
UniProtKB/TrEMBL
Pfam
RHG20_PH
UniProtKB/TrEMBL
RhoGAP
UniProtKB/TrEMBL
PhenoGen
LOC134478921
PhenoGen
PROSITE
RHOGAP
UniProtKB/TrEMBL
RatGTEx
ENSRNOG00000069216
RatGTEx
SMART
RhoGAP
UniProtKB/TrEMBL
Superfamily-SCOP
GTPase activation domain, GAP
UniProtKB/TrEMBL
PH domain-like
UniProtKB/TrEMBL
UniProt
A0A8I5ZY49
ENTREZGENE, UniProtKB/TrEMBL
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Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2024-03-05
LOC134478921
uncharacterized LOC134478921
Symbol and Name status set to provisional
70820
PROVISIONAL