LOC134485799 (TD and POZ domain-containing protein 2-like) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: LOC134485799 (TD and POZ domain-containing protein 2-like) Rattus norvegicus
Analyze
Symbol: LOC134485799 (Ensembl: LOC120101034)
Name: TD and POZ domain-containing protein 2-like (Ensembl:TD and POZ domain-containing protein 3-like)
RGD ID: 402023739
Description:
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82183,819,101 - 183,820,195 (-)NCBIGRCr8
mRatBN7.2 Ensembl2181,593,747 - 181,594,880 (+)EnsemblmRatBN7.2 Ensembl
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134485799Ratproteasome-mediated ubiquitin-dependent protein catabolic process involved_inIBAFB:FBgn0264493 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
LOC134485799Ratregulation of proteolysis involved_inIBAFB:FBgn0264493 and PANTHER:PTN0006981631600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134485799Ratcytoplasm is_active_inIBAMGI:1920546 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
LOC134485799Ratnucleus is_active_inIBAFB:FBgn0264493 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134485799Ratubiquitin protein ligase binding enablesIBAPANTHER:PTN000698163 and UniProtKB:O437911600115GO_REF:0000033GO_CentralGO_REF:0000033



.





RefSeq Transcripts XM_063282819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_063282819   ⟹   XP_063138889
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82183,819,101 - 183,820,195 (-)NCBI
Protein RefSeqs XP_063138889 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000083700.1
RefSeq Acc Id: XP_063138889   ⟸   XM_063282819
- UniProtKB: A0A8I6GB22 (UniProtKB/TrEMBL)
BTB   MATH


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 22 of 22 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSRNOG00000064598 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000119727.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.250.3030 UniProtKB/TrEMBL
  6.20.250.50 UniProtKB/TrEMBL
  Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2, Chain A UniProtKB/TrEMBL
  Potassium Channel Kv1.1, Chain A UniProtKB/TrEMBL
InterPro BTB/POZ_dom UniProtKB/TrEMBL
  MATH/TRAF_dom UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/TrEMBL
  TRAF-like UniProtKB/TrEMBL
NCBI Gene LOC134485799 ENTREZGENE
PANTHER SPECKLE-TYPE POZ PROTEIN UniProtKB/TrEMBL
Pfam BTB UniProtKB/TrEMBL
  MATH_2 UniProtKB/TrEMBL
PhenoGen LOC134485799 PhenoGen
PROSITE BTB UniProtKB/TrEMBL
  MATH UniProtKB/TrEMBL
RatGTEx ENSRNOG00000064598 RatGTEx
SMART BTB UniProtKB/TrEMBL
Superfamily-SCOP POZ domain UniProtKB/TrEMBL
  TRAF domain-like UniProtKB/TrEMBL
UniProt A0A8I6GB22 ENTREZGENE, UniProtKB/TrEMBL
1 to 22 of 22 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-05 LOC134485799  TD and POZ domain-containing protein 2-like      Symbol and Name status set to provisional 70820 PROVISIONAL