LOC134485799 (TD and POZ domain-containing protein 2-like) - Rat Genome Database
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Nomenclature History
Gene: LOC134485799 (TD and POZ domain-containing protein 2-like) Rattus norvegicus
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Analyze
General
Array IDs
Symbol:
LOC134485799 (Ensembl: LOC120101034)
Name:
TD and POZ domain-containing protein 2-like (Ensembl:TD and POZ domain-containing protein 3-like)
RGD ID:
402023739
Description:
Type:
protein-coding
RefSeq Status:
MODEL
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCr8
2
183,819,101 - 183,820,195 (-)
NCBI
GRCr8
mRatBN7.2 Ensembl
2
181,593,747 - 181,594,880 (+)
Ensembl
mRatBN7.2 Ensembl
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
Gene Ontology Annotations
Click to see Annotation Summary View
Biological Process
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134485799
Rat
proteasome-mediated ubiquitin-dependent protein catabolic process
involved_in
IBA
FB:FBgn0264493
more ...
1600115
GO_REF:0000033
GO_Central
GO_REF:0000033
LOC134485799
Rat
regulation of proteolysis
involved_in
IBA
FB:FBgn0264493
and
PANTHER:PTN000698163
1600115
GO_REF:0000033
GO_Central
GO_REF:0000033
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Cellular Component
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134485799
Rat
cytoplasm
is_active_in
IBA
MGI:1920546
more ...
1600115
GO_REF:0000033
GO_Central
GO_REF:0000033
LOC134485799
Rat
nucleus
is_active_in
IBA
FB:FBgn0264493
more ...
1600115
GO_REF:0000033
GO_Central
GO_REF:0000033
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Molecular Function
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Only show annotations with direct experimental evidence (0 objects hidden)
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
LOC134485799
Rat
ubiquitin protein ligase binding
enables
IBA
PANTHER:PTN000698163
and
UniProtKB:O43791
1600115
GO_REF:0000033
GO_Central
GO_REF:0000033
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Gene Ontology Annotations
Click to see Annotation Summary View
Biological Process
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proteasome-mediated ubiquitin-dependent protein catabolic process
(IBA)
regulation of proteolysis
(IBA)
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20
30
40
100
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Cellular Component
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cytoplasm
(IBA)
nucleus
(IBA)
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Molecular Function
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ubiquitin protein ligase binding
(IBA)
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References
Genomics
.
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
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Strain/Cell Line
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Tissue
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Sequence
Nucleotide Sequences
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RefSeq Transcripts
XM_063282819
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
GenBank Nucleotide
JAXUCZ010000002
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
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Reference Sequences
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RefSeq Acc Id:
XM_063282819 ⟹ XP_063138889
Type:
CODING
Position:
Rat Assembly
Chr
Position (strand)
Source
GRCr8
2
183,819,101 - 183,820,195 (-)
NCBI
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Protein Sequences
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Protein RefSeqs
XP_063138889
(Get FASTA)
NCBI Sequence Viewer
Ensembl Protein
ENSRNOP00000083700.1
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Reference Protein Sequences
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RefSeq Acc Id:
XP_063138889 ⟸ XM_063282819
- UniProtKB:
A0A8I6GB22
(UniProtKB/TrEMBL)
Protein Domains
BTB
MATH
Transcriptome
eQTL
View at Phenogen
WGCNA
View at Phenogen
Tissue/Strain Expression
View at Phenogen
Additional Information
External Database Links
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Database
Acc Id
Source(s)
Ensembl Genes
ENSRNOG00000064598
Ensembl, UniProtKB/TrEMBL
Ensembl Transcript
ENSRNOT00000119727.1
UniProtKB/TrEMBL
Gene3D-CATH
6.10.250.3030
UniProtKB/TrEMBL
6.20.250.50
UniProtKB/TrEMBL
Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2, Chain A
UniProtKB/TrEMBL
Potassium Channel Kv1.1, Chain A
UniProtKB/TrEMBL
InterPro
BTB/POZ_dom
UniProtKB/TrEMBL
MATH/TRAF_dom
UniProtKB/TrEMBL
SKP1/BTB/POZ_sf
UniProtKB/TrEMBL
TRAF-like
UniProtKB/TrEMBL
NCBI Gene
LOC134485799
ENTREZGENE
PANTHER
SPECKLE-TYPE POZ PROTEIN
UniProtKB/TrEMBL
Pfam
BTB
UniProtKB/TrEMBL
MATH_2
UniProtKB/TrEMBL
PhenoGen
LOC134485799
PhenoGen
PROSITE
BTB
UniProtKB/TrEMBL
MATH
UniProtKB/TrEMBL
RatGTEx
ENSRNOG00000064598
RatGTEx
SMART
BTB
UniProtKB/TrEMBL
Superfamily-SCOP
POZ domain
UniProtKB/TrEMBL
TRAF domain-like
UniProtKB/TrEMBL
UniProt
A0A8I6GB22
ENTREZGENE, UniProtKB/TrEMBL
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Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2024-03-05
LOC134485799
TD and POZ domain-containing protein 2-like
Symbol and Name status set to provisional
70820
PROVISIONAL