Mfcs4 (mammal fish conserved sequence 4) - Rat Genome Database

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Gene: Mfcs4 (mammal fish conserved sequence 4) Mus musculus
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Symbol: Mfcs4
Name: mammal fish conserved sequence 4
RGD ID: 39130656
Description: This region contains a highly conserved sequence that functions as an enhancer in the pharyngeal epithelium. This sequence may regulate expression of the sonic hedgehog (Shh) gene, located approximately 720 kb downstream. [provided by RefSeq, Sep 2016]
Type: biological-region
RefSeq Status: REVIEWED
Previously known as: Rr366631
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39529,392,493 - 29,393,491 (+)NCBIGRCm39GRCm39mm39
GRCm38529,187,495 - 29,188,493 (+)NCBIGRCm38GRCm38mm10GRCm38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:15630479   PMID:19369396   PMID:24859115  


Genomics

Variants

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Variants in Mfcs4
42 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301776Skts3_mskin tumor susceptibility 3 (mouse)Not determined52166729555667403Mouse
1301685Estq2_mestradiol regulated response QTL 2 (mouse)Not determined51563408449634190Mouse
11537367Hmtb11_mhemostasis and thrombosis 11 (mouse)52210082364806579Mouse
4141207Imrfq1_mimmune response to Factor IX QTL 1 (mouse)Not determined5812411742124239Mouse
11537368Hmtb10_mhemostasis and thrombosis 10 (mouse)52210082354500318Mouse
7394748Mom5_mmodifier of Min 5 (mouse)Not determined5884767233475637Mouse
15039371Nmrs21_mNAFLD-associated magnetic resonance shift 21 (mouse)5350482337504823Mouse
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
1300701Cd8ts1_mCD8 T cell subset 1 (mouse)Not determined52721534861215451Mouse
1357478Kdnw1_mkidney weight 1 (mouse)Not determined5891594940529869Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
12904958Gmmq8_mgastrocnemius muscle mass QTL 8 (mouse)5129421124Mouse
14696730Kidlq1_mkidney weight, left QTL 1 (mouse)51356315247563152Mouse
10401122Pgia41_mproteoglycan induced arthritis 41 (mouse)Not determined582314434823280Mouse
1300719Iba5_minduction of brown adipocytes 5 (mouse)Not determined52068699354687134Mouse
1301806Actd2_mactivity-distance traveled 2 (mouse)Not determined5538452039384652Mouse


Expression


Sequence



Additional Information

Database Acc Id Source(s)
NCBI Gene Mfcs4 ENTREZGENE
PhenoGen Mfcs4 PhenoGen