Gm53851 (predicted gene, 53851) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Gm53851 (predicted gene, 53851) Mus musculus
Analyze
Symbol: Gm53851
Name: predicted gene, 53851
RGD ID: 39130216
MGI Page MGI
Description:
Type: ncrna
RefSeq Status: MODEL
Previously known as: LOC118568134; uncharacterized LOC118568134
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914105,901,457 - 105,904,559 (-)NCBIGRCm39GRCm39mm39
Cytogenetic Map14E2.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




.

.
Variants in Gm53851
148 total Variants

1 to 9 of 9 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
10755523Hgb2_mhemoglobin 2 (mouse)14105884654125139656Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
12798541Scvg3_msubcutaneous vessel growth QTL 3 (mouse)14105544636117275989Mouse

1 to 9 of 9 rows





RefSeq Transcripts XR_004938614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC112142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_004938614
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914105,901,457 - 105,904,559 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
MGD MGI:6722739 ENTREZGENE
NCBI Gene LOC118568134 ENTREZGENE
PhenoGen Gm53851 PhenoGen


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-08-03 Gm53851  predicted gene, 53851  LOC118568134  uncharacterized LOC118568134  Symbol and/or name change 5135510 APPROVED