Gm53230 (predicted gene, 53230) - Rat Genome Database
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Summary
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Genomics
Variants
QTLs in Region (GRCm39)
Expression
RNA-SEQ Expression
Sequence
Nucleotide Sequences
Additional Information
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Nomenclature History
Gene: Gm53230 (predicted gene, 53230) Mus musculus
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Analyze
General
Array IDs
Symbol:
Gm53230
Name:
predicted gene, 53230
RGD ID:
39129208
MGI Page
MGI
Description:
Type:
pseudo
RefSeq Status:
MODEL
Previously known as:
LOC115489391; nucleophosmin-like
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCm39
1
191,652,135 - 191,653,050 (+)
NCBI
GRCm39
GRCm39
mm39
Cytogenetic Map
1
H6
NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
References
Genomics
.
Variants
.
Variants in Gm53230
52 total Variants
QTLs in Region (GRCm39)
1 to 10 of 32 rows
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The following
QTLs
overlap with this region.
Full Report
CSV
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Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11039528
Ccc3_m
colitis susceptibility in the Collaborative Cross 3 (mouse)
1
3680142
195051546
Mouse
1301202
Yaa4_m
Y-linked autoimmune acceleration 4 (mouse)
Not determined
1
158468817
192468938
Mouse
1300823
Ath9_m
atherosclerosis 9 (mouse)
Not determined
1
160112768
194112883
Mouse
1558802
Skmw6_m
skeletal muscle weight 6 (mouse)
Not determined
1
167954584
195154279
Mouse
1301652
Cpfd2_m
cerebellum pattern fissures (mouse)
Not determined
1
172303451
195154279
Mouse
12790987
Tgl5_m
triglyceride 5 (mouse)
1
160097157
194097157
Mouse
1301339
Hdlq15_m
HDL QTL 15 (mouse)
Not determined
1
165873675
195154279
Mouse
11059556
Lmr20b_m
leishmaniasis resistance 20b (mouse)
1
158468817
192468938
Mouse
11059557
Lmr20a_m
leishmaniasis resistance 20a (mouse)
1
158468817
192468938
Mouse
11059558
Lmr20c_m
leishmaniasis resistance 20c (mouse)
1
158468817
192468938
Mouse
10043863
Swrl5_m
SWR lupus locus 5 (mouse)
Not determined
1
172303451
195154279
Mouse
12790988
Phdlc5_m
plasma HDL cholesterol 5 (mouse)
9
160097157
194097157
Mouse
1301596
Elnt_m
escape latencies during navigation task (mouse)
Not determined
1
162145207
194111528
Mouse
11049575
Lmr8b_m
leishmaniasis resistance 8b (mouse)
1
172303451
195154279
Mouse
1301251
Scc3_m
colon tumor susceptibility 3 (mouse)
Not determined
1
168213823
195154279
Mouse
1301632
Bw8q1_m
body weight at 8 weeks QTL 1 (mouse)
Not determined
1
161201261
195154279
Mouse
4141483
Femwf7_m
femur work to failure 7 (mouse)
Not determined
167462514
195154279
Mouse
1302023
Orch4_m
autoimmune orchitis resistance 4 (mouse)
Not determined
1
175211318
195154279
Mouse
10402498
Lmr20_m
leishmaniasis resistance 20 (mouse)
Not determined
1
158468817
192468938
Mouse
1302158
Fembrs5_m
femur breaking strength 5 (mouse)
Not determined
1
167462514
195154279
Mouse
14700797
Mencq2_m
meniscus calcification QTL 2 (mouse)
1
191583112
192212308
Mouse
1301132
Mors1_m
modifier of obesity related sterility 1 (mouse)
Not determined
1
170379500
195154279
Mouse
1357620
Aaj1_m
anxiety in A/J 1 (mouse)
Not determined
1
180832317
191851043
Mouse
1301431
Pcho1_m
plasma cholesterol 1 (mouse)
Not determined
1
159262573
193262693
Mouse
1300727
Mptp1_m
MPTP sensitivity 1 (mouse)
Not determined
1
171632048
192681050
Mouse
1559024
Zit1_m
zinc induced tolerance 1 (mouse)
Not determined
1
167462514
195154279
Mouse
1357692
Axtq1_m
anxiety QTL 1 (mouse)
Not determined
1
180832317
191851043
Mouse
12880429
V25Dq1_m
vitamin D inactive form serum level QTL 1 (mouse)
1
172632197
195154279
Mouse
12880426
V25Dq2_m
vitamin D inactive form serum level QTL 2 (mouse)
1
172532197
195154279
Mouse
1357732
Tbbmd1_m
total body bone mineral density 1 (mouse)
Not determined
1
171983110
195154279
Mouse
1300842
Sle9_m
systematic lupus erythematosus susceptibility 9 (mouse)
Not determined
1
158468817
192468938
Mouse
11532690
Sluc37_m
susceptibility to lung cancer 37 (mouse)
1
175468817
194111528
Mouse
1 to 10 of 32 rows
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Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
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Sequence
Nucleotide Sequences
1 to 1 of 1 rows
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All Rows
GenBank Nucleotide
AC114603
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
1 to 1 of 1 rows
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Additional Information
External Database Links
1 to 3 of 3 rows
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All Rows
Database
Acc Id
Source(s)
MGD
MGI:6721539
ENTREZGENE
NCBI Gene
LOC115489391
ENTREZGENE
PhenoGen
Gm53230
PhenoGen
1 to 3 of 3 rows
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Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2021-08-03
Gm53230
predicted gene, 53230
LOC115489391
nucleophosmin-like
Symbol and/or name change
5135510
APPROVED