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Gene: Gm15634 (predicted gene 15634) Mus musculus

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Symbol:

Gm15634

Name:

predicted gene 15634

RGD ID:

39129139

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

VALIDATED

Previously known as:

LOC118567567; uncharacterized LOC118567567

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	46,605,515 - 46,609,289 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	46,605,515 - 46,609,309 (+)	Ensembl		GRCm39 Ensembl
Cytogenetic Map	8	B1.1	NCBI
cM Map	8	26.16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

cellular_component (ND)

Molecular Function

molecular_function (ND)

References

Genomics

Variants

Variants in Gm15634
274 total Variants

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301139	Lmr10_m	leishmaniasis resistance 10 (mouse)			Not determined		8	35321097	57797633	Mouse
1558870	Eae36_m	experimental allergic encephalomyelitis susceptibility 36 (mouse)			Not determined		8	14773160	71498244	Mouse
11049577	Lmr10b_m	leishmaniasis resistance 10b (mouse)					8	35321097	57797633	Mouse
4141437	W10q14_m	weight 10 weeks QTL 14 (mouse)			Not determined			32506572	71740637	Mouse
11049578	Lmr10c_m	leishmaniasis resistance 10c (mouse)					8	35321097	57797633	Mouse
1301013	Capsq4_m	capsaicin sensitivity related QTL 4 (mouse)			Not determined		8	36630154	93455280	Mouse
11041902	Lmr10a_m	leishmaniasis resistance 10a (mouse)					8	35321097	57797633	Mouse
4141172	W6q9_m	weight 6 weeks QTL 9 (mouse)			Not determined			32506572	71740637	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	35109930	115563747	Mouse
10043990	Hbnr12_m	Heligmosomoides bakeri nematode resistance 12 (mouse)			Not determined		8	33277016	51290537	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32506572	117965439	Mouse
4140966	Egq12_m	early growth QTL 12 (mouse)			Not determined			32506572	71740637	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37867154	110326632	Mouse
10043974	Obq30_m	obesity QTL 30 (mouse)			Not determined		8	26583322	60583322	Mouse
1301298	Pgia4_m	proteoglycan induced arthritis 4 (mouse)			Not determined		8	16569373	50569697	Mouse
1301936	Trigq2_m	triglyceride QTL 2 (mouse)			Not determined		8	34290397	68290537	Mouse
1300912	Daq19_m	directional asymmetry QTL 19 (mouse)			Not determined		8	15506572	49506729	Mouse
13524525	Bodwtq7_m	body wweight QTL 7 (mouse)					8	28249556	47027681	Mouse
1357811	Orq3_m	ovulation rate QTL 3 (mouse)			Not determined		8	32506572	71740637	Mouse
1300603	Cd8ts2_m	CD8 T cell subset 2 (mouse)			Not determined		8	19455018	53455150	Mouse
12904744	Carcdq1_m	cardiac collagen deposition QTL 1 (mouse)					8	40162297	95416226	Mouse
1301088	Alcw6_m	alcohol withdrawal 6 (mouse)			Not determined		8	15506572	49506729	Mouse
1301544	Iba3_m	induction of brown adipocytes 3 (mouse)			Not determined		8	44747914	78748059	Mouse
1301160	Eae14_m	susceptibility to experimental allergic encephalomyelitis 14 (mouse)			Not determined		8	19455018	53455150	Mouse
1301550	Fembrs2_m	femur breaking strength 2 (mouse)			Not determined		8	18321097	52321225	Mouse

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	NR_190357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_190358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004935006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004935007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000147206

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	46,605,515 - 46,609,309 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000247329

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	46,605,620 - 46,609,137 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000327803

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	46,605,619 - 46,606,745 (+)	Ensembl

RefSeq Acc Id:

XR_004935006

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	46,605,515 - 46,606,738 (+)	NCBI

Sequence:

show sequence

CGGGACCTGCGGCTGAGTGACAGTGGGGCGGGGTCGCCCCGCCCACCCGGGGCGGGGGCGGCCG
GAAAGGGGCGCGACCAATCGCAGTGGACCCCGCTACTTCCCGAGCCCCGCCCCCGCCCCCCGGG
GACCGCGTCTGTTCGTGGAAAATTTTGCTGCAGGTGTCAGAAGCCTGCGTTGAGCTCCGCTCAG
GGTCTCTCTGTGTAAACCTGGCTATCCTGAAACTCACTATGTGGACCAGGCTAGTCTGGACCCC
CCCAGAGATCTACTTGCCTCTGCTTTCAGAGTGCTGGAATCAAAGGTGTGCAGCCTAGGTTTGC
AGTGTTCGCTAATATGGTGATGGGTAGTGCCCTCCGAGTAGCAGACAAGTAACATAGGTGTTAC
AATGCAGTGTTATATATTGTGGCTACACTGGGTTTTTGGTTTTGTTTTGTTTTTTTCTGTAAAG
GGGTTGTTCCATCTGTAATAAGTATTGTGCCATTTCATCAAAAAAAAGGAAAAAAGTCACAATA
CTCATGAATAAAGTGCTTGCTTACTTGCTTGCTTAAAA

hide sequence

RefSeq Acc Id:

XR_004935007

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	46,605,515 - 46,609,289 (+)	NCBI

Sequence:

show sequence

CGGGACCTGCGGCTGAGTGACAGTGGGGCGGGGTCGCCCCGCCCACCCGGGGCGGGGGCGGCCG
GAAAGGGGCGCGACCAATCGCAGTGGACCCCGCTACTTCCCGAGCCCCGCCCCCGCCCCCCGGG
GACCGCGTCTGTTCGTGGAAAATTTTGCTGCAGGTGTCAGAAGCCTGCGTTGAGCTCCGCTCAG
GGTCTCTCTGTGTAAACCTGGCTATCCTGAAACTCACTATGTGGACCAGGCTAGTCTGGACCCC
CCCAGAGATCTACTTGCCTCTGCTTTCAGAGTGCTGGAATCAAAGAACCCAGGGAACTCCCTCA
GAAGAGGAGCCAGAAAGAATGTAAGAGCAGACAGGATGGAGGACTGCAAGAAAGCAAGGCCCTC
TAAATCAACATGAGCAGAGCTCATATGAACTCACAGAGACTGAGGCGGCATGCACAGGGCCTGC
ATGAGTCTGCACCAGGTCCTCTGCACATATATTATGGCTTCTACTTTAATGGGATTCCTGATGA
GCAAATGAATGGGTCTTTGATTCTTGTGCCTTCTGTTGGGCTCTTTTCCTTCTCTTACCCAACT
TTGATGTGATAGTTTTTGTCTTATTATATTTGATTATGTTGTATTTTATTATTGTCTCTTAGAA
GTCTCTTCTTTTCAACTGGGAGACCAAAAGGGAATGGACCCAGATGGGAGGGAAGGTGGGGAAG
ACCTGGGAGGAGTAGAGGGAAGGAAAACCATAATCAGGATATATTATGGGAGAAAGGAATCTAT
TTTAAATA

hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000086279	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000147206	ENTREZGENE
	ENSMUST00000327803	ENTREZGENE
MGD	MGI:3783078	ENTREZGENE
NCBI Gene	LOC118567567	ENTREZGENE
PhenoGen	Gm15634	PhenoGen

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-06-15	Gm15634	predicted gene 15634	LOC118567567	uncharacterized LOC118567567	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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