LOC100422495 (protein tyrosine phosphatase non-receptor type 4 pseudogene) - Rat Genome Database

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Gene: LOC100422495 (protein tyrosine phosphatase non-receptor type 4 pseudogene) Homo sapiens
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Symbol: LOC100422495
Name: protein tyrosine phosphatase non-receptor type 4 pseudogene
RGD ID: 38657092
Description:
Type: pseudo
RefSeq Status: INFERRED
Related Functional Gene: PTPN4  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3886,718,327 - 6,721,010 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3786,575,848 - 6,578,531 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8p23.1NCBI
HuRef86,356,813 - 6,359,425 (+)NCBIHuRef
CHM1_186,665,200 - 6,667,815 (+)NCBICHM1_1
T2T-CHM13v2.086,473,722 - 6,476,404 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

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Variants

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Variants in LOC100422495
1 total Variants

QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597101729GWAS1197803_Hserum alanine aminotransferase measurement QTL GWAS1197803 (human)8e-09serum alanine aminotransferase measurementserum alanine aminotransferase activity level (CMO:0000575)867196196719620Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC100422495 COSMIC
GTEx LOC100422495 GTEx
Human Proteome Map LOC100422495 Human Proteome Map
NCBI Gene LOC100422495 ENTREZGENE