LOC129663579 (ReSE screen-validated silencer GRCh37_chr15:49136024-49136191) - Rat Genome Database

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Gene: LOC129663579 (ReSE screen-validated silencer GRCh37_chr15:49136024-49136191) Homo sapiens
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Symbol: LOC129663579
Name: ReSE screen-validated silencer GRCh37_chr15:49136024-49136191
RGD ID: 329343565
Description: This genomic sequence represents an accessible chromatin region used in a lentiviral ReSE (repressive ability of silencer elements) screen that assays for cell survival based on transcriptional repression of an apoptosis-inducing fusion protein. This region was identified as a functional silencer in K562 erythroleukemia cells. [provided by RefSeq, Apr 2023]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381548,843,827 - 48,843,994 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371549,136,024 - 49,136,191 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.01546,652,030 - 46,652,197 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:32094911  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC129663579 COSMIC
GTEx LOC129663579 GTEx
Human Proteome Map LOC129663579 Human Proteome Map
NCBI Gene LOC129663579 ENTREZGENE