LOC129663609 (ReSE screen-validated silencer GRCh37_chr15:59908775-59909010) - Rat Genome Database

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Gene: LOC129663609 (ReSE screen-validated silencer GRCh37_chr15:59908775-59909010) Homo sapiens
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Symbol: LOC129663609
Name: ReSE screen-validated silencer GRCh37_chr15:59908775-59909010
RGD ID: 329339007
Description: This genomic sequence represents an accessible chromatin region used in a lentiviral ReSE (repressive ability of silencer elements) screen that assays for cell survival based on transcriptional repression of an apoptosis-inducing fusion protein. This region was identified as a functional silencer in phorbol 12-myristate 13-acetate-treated (for megakaryocytic differentiation) K562 erythroleukemia cells. [provided by RefSeq, Apr 2023]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381559,616,576 - 59,616,811 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371559,908,775 - 59,909,010 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.01557,418,269 - 57,418,504 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:32094911  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC129663609 COSMIC
GTEx LOC129663609 GTEx
Human Proteome Map LOC129663609 Human Proteome Map
NCBI Gene LOC129663609 ENTREZGENE