LOC129660073 (ReSE screen-validated silencer GRCh37_chr1:6518900-6519106) - Rat Genome Database

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Gene: LOC129660073 (ReSE screen-validated silencer GRCh37_chr1:6518900-6519106) Homo sapiens
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Symbol: LOC129660073
Name: ReSE screen-validated silencer GRCh37_chr1:6518900-6519106
RGD ID: 329338263
Description: This genomic sequence represents an accessible chromatin region used in a lentiviral ReSE (repressive ability of silencer elements) screen that assays for cell survival based on transcriptional repression of an apoptosis-inducing fusion protein. This region was identified as a functional silencer in K562 erythroleukemia cells. [provided by RefSeq, Apr 2023]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3816,458,840 - 6,459,046 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3716,518,900 - 6,519,106 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.015,984,482 - 5,984,688 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:32094911  



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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
RefSeq Transcripts NG_157112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL158217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles



Database
Acc Id
Source(s)
COSMIC LOC129660073 COSMIC
GTEx LOC129660073 GTEx
Human Proteome Map LOC129660073 Human Proteome Map
NCBI Gene LOC129660073 ENTREZGENE