Gm7851 (predicted gene 7851) - Rat Genome Database

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Gene: Gm7851 (predicted gene 7851) Mus musculus
Analyze
Symbol: Gm7851
Name: predicted gene 7851
RGD ID: 2310063
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: EG665929
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X51,871,571 - 51,871,893 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX51,871,571 - 51,871,893 (-)EnsemblGRCm39 Ensembl
GRCm38X52,782,694 - 52,783,016 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX52,782,694 - 52,783,016 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X50,135,871 - 50,136,193 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X50,135,871 - 50,136,193 (-)NCBIMGSCv36mm8
CeleraX40,198,172 - 40,198,494 (-)NCBICelera
Cytogenetic MapXA5NCBI
cM MapX29.18NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14610273  


Genomics

Variants

.
Variants in Gm7851
12 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:84
Count of miRNA genes:83
Interacting mature miRNAs:83
Transcripts:ENSMUST00000117574
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
27226750Femd9_mfemur midshaft diameter 9, 10 week (mouse)X3333746355845360Mouse
27226780Femd12_mfemur midshaft diameter 12, 16 week (mouse)X3466365356845360Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
1301212Bw19_mbody weight QTL 19 (mouse)Not determinedX4637692052412327Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
1300853Aggr2_maggression 2 (mouse)Not determinedX4907116752259196Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide BX936351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000117574
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX51,871,571 - 51,871,893 (-)Ensembl
GRCm38.p6 EnsemblX52,782,694 - 52,783,016 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000081843 Ensembl, ENTREZGENE
MGD MGI:3648946 ENTREZGENE
NCBI Gene Gm7851 ENTREZGENE
PhenoGen Gm7851 PhenoGen