Gm2053 (predicted gene 2053) - Rat Genome Database

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Gene: Gm2053 (predicted gene 2053) Mus musculus
Analyze
Symbol: Gm2053
Name: predicted gene 2053
RGD ID: 2308989
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: 100039121
Related Functional Gene: Tacc3  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914,805,273 - 4,805,902 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14,805,269 - 4,805,899 (-)EnsemblGRCm39 Ensembl
GRCm3814,735,050 - 4,735,679 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14,735,046 - 4,735,676 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714,725,130 - 4,725,759 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3614,720,207 - 4,754,789 (-)NCBIMGSCv36mm8
Celera14,746,936 - 4,747,565 (-)NCBICelera
Cytogenetic Map1A1NCBI
cM Map11.79NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301275Sle10_msystematic lupus erythematosus susceptibility 10 (mouse)Not determined1288219436882352Mouse
15092046Wngrme1_mweek nine growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301370Adip1_madiposity 1 (mouse)Not determined1288219436882352Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
15092044Wtgrme1_mweek ten growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301471Obq2_mobesity QTL 2 (mouse)Not determined1394162037941887Mouse
1301891Alcp25_malcohol preference locus 25 (mouse)Not determined1125203185Mouse
1300834Cia20_mcollagen induced arthritis 20 (mouse)Not determined1125203185Mouse
15092055Lgrme1_mlate growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092050Wsegrme1_mweek seven growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092051Wegrme1_mweek eight growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092048Wsigrme1_mweek six growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301482Morph1_mmorphine antinociception 1 (mouse)Not determined1130367747Mouse
10412226Alpq4_malcohol preference QTL 4 (mouse)Not determined1122976684Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_018418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC117576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000195671
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14,805,269 - 4,805,899 (-)Ensembl
GRCm38.p6 Ensembl14,735,046 - 4,735,676 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000103265 Ensembl, ENTREZGENE
MGD MGI:3780221 ENTREZGENE
NCBI Gene 100039121 ENTREZGENE
PhenoGen Gm2053 PhenoGen