RPL23AP21 (ribosomal protein L23a pseudogene 21) - Rat Genome Database

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Gene: RPL23AP21 (ribosomal protein L23a pseudogene 21) Homo sapiens
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Symbol: RPL23AP21
Name: ribosomal protein L23a pseudogene 21
RGD ID: 2305463
HGNC Page HGNC:35827
Description: INTERACTS WITH chloropicrin
Type: pseudo
RefSeq Status: INFERRED
Previously known as: AP006222.1; ribosomal protein L23a (RPL23A) pseudogene; RPL23A_1_1
Related Functional Gene: RPL23A  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381258,511 - 259,036 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,864 - 359,681 (-)NCBIGRCh38hg38GRCh38
GRCh371228,262 - 228,787 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361217,633 - 218,641 (-)NCBINCBI36Build 36hg18NCBI36
Cytogenetic Map1p36.33NCBI
HuRef1219,471,909 - 219,472,919 (+)NCBIHuRef
CHM1_11227,856 - 228,875 (-)NCBICHM1_1
T2T-CHM13v2.02011,293 - 11,818 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
chloropicrin  (EXP)

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19123937  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_015292
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
Build 361217,633 - 218,641 (-)NCBI Archive

Additional Information

Database Acc Id Source(s)
COSMIC RPL23AP21 COSMIC
Ensembl Genes ENSG00000228463 ENTREZGENE
GTEx ENSG00000228463 GTEx
HGNC ID HGNC:35827 ENTREZGENE
Human Proteome Map RPL23AP21 Human Proteome Map
NCBI Gene 728481 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-07 RPL23AP21  ribosomal protein L23a pseudogene 21  AP006222.1  ribosomal protein L23a (RPL23A) pseudogene  Data merged from RGD:16554114 737654 PROVISIONAL