RPL26P34 (ribosomal protein L26 pseudogene 34) - Rat Genome Database

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Gene: RPL26P34 (ribosomal protein L26 pseudogene 34) Homo sapiens
Analyze
Symbol: RPL26P34
Name: ribosomal protein L26 pseudogene 34
RGD ID: 2304668
HGNC Page HGNC:36249
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: RPL26_13_1302
Related Functional Gene: RPL26  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381324,704,338 - 24,704,788 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1324,704,338 - 24,704,788 (-)EnsemblGRCh38hg38GRCh38
GRCh371325,278,476 - 25,278,926 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361325,278,476 - 25,278,926 (-)NCBINCBI36Build 36hg18NCBI36
Celera136,341,693 - 6,342,143 (-)NCBICelera
Cytogenetic Map13q12.12NCBI
HuRef136,091,471 - 6,091,921 (-)NCBIHuRef
CHM1_11325,246,997 - 25,247,447 (-)NCBICHM1_1
T2T-CHM13v2.01323,912,410 - 23,912,860 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:19123937  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:150
Count of miRNA genes:146
Interacting mature miRNAs:149
Transcripts:ENST00000431005
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 3 34 1 2 1 4 11
Below cutoff 24 19 11 5 14 2 253 17 31 16 79 33 3 7 106

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000431005
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1324,704,338 - 24,704,788 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RPL26P34 COSMIC
Ensembl Genes ENSG00000225404 Ensembl, ENTREZGENE
GTEx ENSG00000225404 GTEx
HGNC ID HGNC:36249 ENTREZGENE
Human Proteome Map RPL26P34 Human Proteome Map
NCBI Gene 100271470 ENTREZGENE