Gm5184 (predicted gene 5184) - Rat Genome Database

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Gene: Gm5184 (predicted gene 5184) Mus musculus
Analyze
Symbol: Gm5184
Name: predicted gene 5184
RGD ID: 2302694
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG382601
Related Functional Gene: Mybbp1a  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391256,236,198 - 56,237,994 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1256,236,199 - 56,237,900 (+)EnsemblGRCm39 Ensembl
GRCm381256,189,413 - 56,191,209 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1256,189,414 - 56,191,115 (+)EnsemblGRCm38mm10GRCm38
MGSCv371257,290,389 - 57,292,203 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361256,980,131 - 57,161,111 (+)NCBIMGSCv36mm8
Celera1257,338,175 - 57,339,989 (+)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1224.27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm5184
67 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123493387268934019Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123509100465511019Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125284662686846796Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125313200287132145Mouse
12904004Opfaq11_mopen field activity QTL 11 (mouse)125315562457276756Mouse
12832727Ahrq1_mairway hyperresponsiveness QTL 1 (mouse)125469591082665939Mouse
12903999Opfaq8_mopen field activity QTL 8 (mouse)125490765357870585Mouse

Markers in Region
RH136313  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381256,190,912 - 56,191,110UniSTSGRCm38
GRCm381172,451,256 - 72,451,451UniSTSGRCm38
MGSCv371172,264,758 - 72,264,953UniSTSGRCm37
MGSCv371257,291,899 - 57,292,097UniSTSGRCm37
Celera1257,339,685 - 57,339,883UniSTS
Celera1179,971,723 - 79,971,918UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map12C1UniSTS
cM Map1140.0UniSTS
UniSTS:236851  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381256,190,476 - 56,190,737UniSTSGRCm38
GRCm381172,450,720 - 72,451,082UniSTSGRCm38
MGSCv371172,264,222 - 72,264,584UniSTSGRCm37
MGSCv371257,291,463 - 57,291,724UniSTSGRCm37
Celera1257,339,249 - 57,339,510UniSTS
Celera1179,971,187 - 79,971,549UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map12C1UniSTS
cM Map1140.0UniSTS
UniSTS:224717  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381256,124,141 - 56,124,309UniSTSGRCm38
MGSCv371257,225,128 - 57,225,296UniSTSGRCm37
Celera1257,272,904 - 57,273,072UniSTS
Cytogenetic Map12C1UniSTS
STS-Z40707  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371257,335,474 - 57,335,630UniSTSGRCm37
Celera1257,383,184 - 57,383,340UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000220417
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1256,236,199 - 56,237,900 (+)Ensembl
GRCm38.p6 Ensembl1256,189,414 - 56,191,115 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000112650 Ensembl, ENTREZGENE
MGD MGI:3647558 ENTREZGENE
NCBI Gene 382601 ENTREZGENE
PhenoGen Gm5184 PhenoGen