KCTD5 (potassium channel tetramerization domain containing 5) - Rat Genome Database

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Gene: KCTD5 (potassium channel tetramerization domain containing 5) Chlorocebus sabaeus
Analyze
Symbol: KCTD5
Name: potassium channel tetramerization domain containing 5
RGD ID: 20866672
Description: ENCODES a protein that exhibits cullin family protein binding (inferred); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (inferred); protein homooligomerization (inferred); FOUND IN Cul3-RING ubiquitin ligase complex (inferred); cytoplasm (inferred)
Type: protein-coding
Latest Assembly: ChlSab1.1 Ensembl - Green Monkey 1.1 Assembly Ensembl
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl52,451,615 - 2,467,528 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 33 7 31
Low 3 13 29
Below cutoff

Sequence

Nucleotide Sequences

RefSeq Acc Id: ENSCSAT00000008540   ⟹   ENSCSAP00000006683
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl52,451,615 - 2,467,528 (+)Ensembl
Protein Sequences
Ensembl Protein ENSCSAP00000006683.1
RefSeq Acc Id: ENSCSAP00000006683   ⟸   ENSCSAT00000008540


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000010469 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000008540.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.2000 UniProtKB/TrEMBL
  6.10.140.750 UniProtKB/TrEMBL
InterPro SKP1/BTB/POZ_sf UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/TrEMBL
PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN KCTD5 UniProtKB/TrEMBL
  POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/TrEMBL
UniProt A0A0D9RDJ4_CHLSB UniProtKB/TrEMBL