MEF2B (myocyte enhancer factor 2B) - Rat Genome Database

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Gene: MEF2B (myocyte enhancer factor 2B) Chlorocebus sabaeus
Analyze
Symbol: MEF2B
Name: myocyte enhancer factor 2B
RGD ID: 20866113
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN animal organ development (inferred); positive regulation of transcription by RNA polymerase II (inferred); regulation of transcription by RNA polymerase II (inferred); FOUND IN cell junction (inferred); cytosol (inferred); nucleoplasm (inferred)
Type: protein-coding
Previously known as: BORCS8-MEF2B; BORCS8-MEF2B readthrough
Latest Assembly: ChlSab1.1 Ensembl - Green Monkey 1.1 Assembly Ensembl
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl617,611,106 - 17,616,339 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium
Low 36 14 27
Below cutoff 5 31

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSCSAT00000003251   ⟹   ENSCSAP00000001535
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl617,611,106 - 17,616,339 (-)Ensembl
Protein Sequences
Ensembl Protein ENSCSAP00000001535.1
Reference Protein Sequences
RefSeq Acc Id: ENSCSAP00000001535   ⟸   ENSCSAT00000003251


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000005217 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000003251.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.1810.10 UniProtKB/TrEMBL
InterPro MADS_MEF2-like UniProtKB/TrEMBL
  TF_MADSbox UniProtKB/TrEMBL
  TF_MADSbox_sf UniProtKB/TrEMBL
PANTHER MYOCYTE-SPECIFIC ENHANCER FACTOR 2A UniProtKB/TrEMBL
  SERUM RESPONSE FACTOR HOMOLOG UniProtKB/TrEMBL
Pfam SRF-TF UniProtKB/TrEMBL
PRINTS MADSDOMAIN UniProtKB/TrEMBL
PROSITE MADS_BOX_1 UniProtKB/TrEMBL
  MADS_BOX_2 UniProtKB/TrEMBL
SMART MADS UniProtKB/TrEMBL
Superfamily-SCOP SSF55455 UniProtKB/TrEMBL
UniProt A0A0D9QYU6_CHLSB UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-05-06 MEF2B  myocyte enhancer factor 2B  BORCS8-MEF2B  BORCS8-MEF2B readthrough  Symbol and/or name change 19259462 PROVISIONAL
2021-02-23 BORCS8-MEF2B  BORCS8-MEF2B readthrough  MEF2B  myocyte enhancer factor 2B  Symbol and/or name change 19259462 PROVISIONAL