ZFP90 (ZFP90 zinc finger protein) - Rat Genome Database

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Gene: ZFP90 (ZFP90 zinc finger protein) Chlorocebus sabaeus
Analyze
Symbol: ZFP90
Name: ZFP90 zinc finger protein
RGD ID: 20866004
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription repressor activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); INVOLVED IN negative regulation of DNA-templated transcription (inferred); negative regulation of transcription by RNA polymerase II (inferred); positive regulation of DNA-templated transcription (inferred); FOUND IN nucleus (inferred)
Type: protein-coding
Latest Assembly: ChlSab1.1 Ensembl - Green Monkey 1.1 Assembly Ensembl
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl558,839,892 - 58,850,116 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IEA)

Molecular Function

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 35 60
Low 1 20
Below cutoff

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSCSAT00000002119   ⟹   ENSCSAP00000000447
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl558,839,892 - 58,850,116 (-)Ensembl
Protein Sequences
Ensembl Protein ENSCSAP00000000447.1
Reference Protein Sequences
RefSeq Acc Id: ENSCSAP00000000447   ⟸   ENSCSAT00000002119


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000004087 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000002119.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
PANTHER KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 8 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A0D9QVQ8_CHLSB UniProtKB/TrEMBL