ZNF418 (zinc finger protein 418) - Rat Genome Database

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Gene: ZNF418 (zinc finger protein 418) Chlorocebus sabaeus
Analyze
Symbol: ZNF418
Name: zinc finger protein 418
RGD ID: 20865727
Description: ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); DNA-binding transcription repressor activity (inferred); metal ion binding (inferred); INVOLVED IN negative regulation of DNA-templated transcription (inferred); positive regulation of transcription by RNA polymerase II (inferred); regulation of transcription by RNA polymerase II (inferred); FOUND IN nucleus (inferred)
Type: protein-coding
Latest Assembly: ChlSab1.1 Ensembl - Green Monkey 1.1 Assembly Ensembl
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl650,257,620 - 50,261,468 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IEA)

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 15
Low 36 20 45
Below cutoff

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENSCSAT00000016915   ⟹   ENSCSAP00000016410
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl650,257,620 - 50,261,468 (-)Ensembl
Protein Sequences
Ensembl Protein ENSCSAP00000016410.1
Reference Protein Sequences
RefSeq Acc Id: ENSCSAP00000016410   ⟸   ENSCSAT00000016915


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000001615 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000016915.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
PANTHER ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 814 UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt A0A0D9S6C1_CHLSB UniProtKB/TrEMBL