Znf251 (zinc finger protein 251) - Rat Genome Database

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Gene: Znf251 (zinc finger protein 251) Heterocephalus glaber
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Symbol: Znf251
Name: zinc finger protein 251
RGD ID: 18936723
Description: INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Baller-Gerold syndrome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473512,151,653 - 12,184,397 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473512,151,600 - 12,185,517 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Znf251
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473512,151,653 - 12,184,397 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473512,151,600 - 12,185,517 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ZNF251
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388144,720,909 - 144,755,531 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8144,720,907 - 144,756,417 (-)EnsemblGRCh38hg38GRCh38
GRCh378145,946,294 - 145,980,916 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368145,917,103 - 145,951,775 (-)NCBINCBI36Build 36hg18NCBI36
Celera8142,123,518 - 142,158,192 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8141,061,657 - 141,096,293 (-)NCBIHuRef
CHM1_18145,984,591 - 146,019,189 (-)NCBICHM1_1
T2T-CHM13v2.08145,894,425 - 145,929,038 (-)NCBIT2T-CHM13v2.0
Zfp251
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391576,736,331 - 76,755,635 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1576,735,809 - 76,755,635 (-)EnsemblGRCm39 Ensembl
GRCm381576,852,131 - 76,871,435 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1576,851,609 - 76,871,435 (-)EnsemblGRCm38mm10GRCm38
MGSCv371576,682,561 - 76,701,865 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361576,679,386 - 76,698,690 (-)NCBIMGSCv36mm8
Celera1578,347,095 - 78,366,354 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1536.28NCBI
Zfp251
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87110,449,194 - 110,479,218 (-)NCBIGRCr8
mRatBN7.27108,568,564 - 108,598,593 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7108,568,597 - 108,598,623 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7110,312,753 - 110,340,840 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07112,536,336 - 112,564,423 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07112,497,764 - 112,525,856 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07117,909,976 - 117,939,274 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7117,909,961 - 117,940,007 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07117,898,208 - 117,924,579 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47114,897,922 - 114,925,890 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17114,932,151 - 114,960,686 (-)NCBI
Celera7104,919,781 - 104,946,875 (-)NCBICelera
Cytogenetic Map7q34NCBI
Znf251
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554543,285,093 - 3,316,793 (-)NCBIChiLan1.0ChiLan1.0
ZNF251
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27162,212,435 - 162,247,916 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18137,745,896 - 137,781,290 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08141,491,963 - 141,527,617 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18144,472,476 - 144,507,437 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8144,472,476 - 144,507,415 (-)Ensemblpanpan1.1panPan2
Znf251
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303165,797 - 194,187 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364707,598,289 - 7,631,740 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364707,591,956 - 7,620,288 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF251
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4186,673 - 193,130 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14186,689 - 193,100 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24153,550 - 159,146 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF251
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18138,917,029 - 138,953,823 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8138,913,808 - 138,953,862 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666039888,511 - 926,334 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000018367   ⟹   ENSHGLP00000018186
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473512,151,653 - 12,184,397 (+)Ensembl
RefSeq Acc Id: XM_013068993   ⟹   XP_012924447
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473512,151,600 - 12,185,517 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012924447 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_012924447   ⟸   XM_013068993
Ensembl Acc Id: ENSHGLP00000018186   ⟸   ENSHGLT00000018367


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012998 Ensembl
NCBI Gene Znf251 ENTREZGENE