Klk12 (kallikrein related peptidase 12) - Rat Genome Database

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Gene: Klk12 (kallikrein related peptidase 12) Heterocephalus glaber
Analyze
Symbol: Klk12
Name: kallikrein related peptidase 12
RGD ID: 18935497
Description: ENCODES a protein that exhibits peptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: kallikrein-12
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248323,738,677 - 3,744,091 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (ISO)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Klk12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248323,738,677 - 3,744,091 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
KLK12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381951,029,094 - 51,035,002 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1951,029,092 - 51,035,230 (-)EnsemblGRCh38hg38GRCh38
GRCh371951,532,350 - 51,538,258 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361956,224,160 - 56,229,960 (-)NCBINCBI36Build 36hg18NCBI36
Celera1948,584,407 - 48,590,207 (-)NCBICelera
Cytogenetic Map19q13.41NCBI
HuRef1947,864,957 - 47,870,784 (-)NCBIHuRef
CHM1_11951,534,321 - 51,540,123 (-)NCBICHM1_1
T2T-CHM13v2.01954,117,609 - 54,123,558 (-)NCBIT2T-CHM13v2.0
Klk12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39743,418,346 - 43,423,005 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl743,418,321 - 43,423,009 (+)EnsemblGRCm39 Ensembl
GRCm38743,768,891 - 43,773,581 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl743,768,897 - 43,773,585 (+)EnsemblGRCm38mm10GRCm38
MGSCv37751,024,470 - 51,028,851 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36743,637,241 - 43,641,625 (+)NCBIMGSCv36mm8
Celera739,235,763 - 39,240,146 (+)NCBICelera
Cytogenetic Map7B3NCBI
cM Map728.26NCBI
Klk12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81103,359,274 - 103,364,186 (+)NCBIGRCr8
mRatBN7.2194,222,778 - 94,227,637 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl194,223,045 - 94,227,637 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx199,608,934 - 99,613,051 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01108,081,605 - 108,085,722 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01101,371,488 - 101,375,612 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0199,706,148 - 99,711,004 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl199,706,780 - 99,711,004 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01100,774,715 - 100,779,762 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4194,198,530 - 94,203,133 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1194,276,165 - 94,281,244 (+)NCBI
Celera188,492,207 - 88,496,322 (+)NCBICelera
Cytogenetic Map1q22NCBI
Klk12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555581,454,615 - 1,458,928 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555581,454,512 - 1,459,105 (+)NCBIChiLan1.0ChiLan1.0
KLK12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22057,098,830 - 57,104,583 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11959,020,338 - 59,026,083 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01947,996,689 - 48,002,335 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11956,885,704 - 56,891,516 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1956,885,704 - 56,891,516 (-)Ensemblpanpan1.1panPan2
KLK12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11105,845,579 - 105,853,192 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1105,848,940 - 105,853,204 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1105,421,223 - 105,425,600 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01106,357,630 - 106,362,011 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1106,357,758 - 106,362,013 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11106,029,093 - 106,033,469 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01105,670,479 - 105,674,857 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01106,465,946 - 106,470,325 (+)NCBIUU_Cfam_GSD_1.0
LOC101957019
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934922,798,459 - 22,804,411 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936889674,458 - 677,695 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936889674,449 - 677,695 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KLK12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl655,686,623 - 55,692,671 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1655,686,666 - 55,692,706 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
KLK12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1644,048,992 - 44,055,570 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl644,049,073 - 44,054,433 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607324,094,987 - 24,100,842 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013066415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01084351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_013066415   ⟹   XP_012921869
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248323,738,677 - 3,744,091 (+)NCBI
Protein Sequences
Protein RefSeqs XP_012921869 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_012921869   ⟸   XM_013066415


Additional Information

Database Acc Id Source(s)
NCBI Gene Klk12 ENTREZGENE