Prss38 (serine protease 38) - Rat Genome Database

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Gene: Prss38 (serine protease 38) Heterocephalus glaber
Analyze
Symbol: Prss38
Name: serine protease 38
RGD ID: 18930912
Description: ENCODES a protein that exhibits peptidase activity (inferred); INVOLVED IN proteolysis (inferred); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); parathyroid carcinoma (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protease, serine 38
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624937747,419 - 750,488 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Prss38
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624937747,419 - 750,488 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
PRSS38
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381227,815,675 - 227,846,470 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1227,815,675 - 227,846,470 (+)EnsemblGRCh38hg38GRCh38
GRCh371228,003,376 - 228,034,171 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361226,070,041 - 226,100,794 (+)NCBINCBI36Build 36hg18NCBI36
Celera1201,195,098 - 201,225,534 (+)NCBICelera
Cytogenetic Map1q42.13NCBI
HuRef1198,519,556 - 198,549,967 (+)NCBIHuRef
CHM1_11229,276,159 - 229,306,607 (+)NCBICHM1_1
T2T-CHM13v2.01227,004,591 - 227,035,389 (+)NCBIT2T-CHM13v2.0
Prss38
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391159,262,252 - 59,266,504 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1159,263,495 - 59,266,483 (-)EnsemblGRCm39 Ensembl
GRCm381159,371,426 - 59,375,653 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1159,372,669 - 59,375,657 (-)EnsemblGRCm38mm10GRCm38
MGSCv371159,186,171 - 59,189,155 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361159,188,857 - 59,193,796 (-)NCBIMGSCv36mm8
Celera1164,138,627 - 64,141,612 (-)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1137.7NCBI
Prss38
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81044,658,888 - 44,665,089 (-)NCBIGRCr8
mRatBN7.21044,159,339 - 44,163,019 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1044,159,346 - 44,162,488 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1048,853,769 - 48,856,911 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01048,344,140 - 48,347,282 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01043,847,743 - 43,850,885 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01045,723,663 - 45,731,756 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1045,723,914 - 45,726,524 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01045,479,345 - 45,482,470 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41045,678,994 - 45,681,860 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1043,421,130 - 43,424,272 (-)NCBICelera
Cytogenetic Map10q22NCBI
Prss38
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955581455,309 - 458,793 (-)NCBIChiLan1.0ChiLan1.0
PRSS38
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2121,757,660 - 21,791,230 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1121,695,797 - 21,729,345 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01203,185,888 - 203,249,622 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11208,195,825 - 208,226,371 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1208,195,825 - 208,226,371 (+)Ensemblpanpan1.1panPan2
PRSS38
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.114997,712 - 1,007,499 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl14998,162 - 1,008,129 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha14141,876 - 151,599 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.014720,726 - 730,445 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl14721,176 - 730,431 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.114911,282 - 920,994 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.014692,008 - 701,733 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.014680,631 - 690,342 (-)NCBIUU_Cfam_GSD_1.0
Prss38
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721387,934,907 - 87,942,143 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936864277,217 - 279,194 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936864276,834 - 279,194 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRSS38
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1251,858,604 - 1,887,770 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl251,858,861 - 1,887,379 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660551,741,247 - 1,769,934 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004874755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01105869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_004874755   ⟹   XP_004874812
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624937747,419 - 750,488 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004874812 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004874812   ⟸   XM_004874755
- UniProtKB: A0AAX6QH78 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
NCBI Gene Prss38 ENTREZGENE
UniProt A0AAX6QH78 ENTREZGENE, UniProtKB/TrEMBL