CUNH8orf76 (chromosome unknown C8orf76 homolog) - Rat Genome Database

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Gene: CUNH8orf76 (chromosome unknown C8orf76 homolog) Heterocephalus glaber
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Symbol: CUNH8orf76 (Ensembl: C8orf76)
Name: chromosome unknown C8orf76 homolog
RGD ID: 18929080
Description: ASSOCIATED WITH trichorhinophalangeal syndrome type I (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein C8orf76; uncharacterized protein C8orf76 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473531,691,316 - 31,708,444 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473531,691,290 - 31,706,981 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CUNH8orf76Naked Mole-Rattrichorhinophalangeal syndrome type I  ISOC8orf76 (Homo sapiens)8554872ClinVar Annotator: match by term: Trichorhinophalangeal dysplasia type IClinVarPMID:25741868

PMID:22301074  



CUNH8orf76
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473531,691,316 - 31,708,444 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473531,691,290 - 31,706,981 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
C8orf76
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388123,219,967 - 123,241,377 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8123,219,967 - 123,241,377 (-)EnsemblGRCh38hg38GRCh38
GRCh378124,232,207 - 124,253,617 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368124,301,412 - 124,322,798 (-)NCBINCBI36Build 36hg18NCBI36
Celera8120,421,270 - 120,442,656 (-)NCBICelera
Cytogenetic Map8q24.13NCBI
HuRef8119,557,816 - 119,579,268 (-)NCBIHuRef
CHM1_18124,272,483 - 124,293,925 (-)NCBICHM1_1
T2T-CHM13v2.08124,351,104 - 124,372,514 (-)NCBIT2T-CHM13v2.0
9130401M01Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391557,885,666 - 57,897,690 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1557,885,655 - 57,897,721 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl1557,891,639 - 57,939,821 (-)EnsemblGRCm39 Ensembl
GRCm381558,022,270 - 58,034,294 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1558,022,259 - 58,034,325 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1558,028,243 - 58,076,425 (-)EnsemblGRCm38mm10GRCm38
MGSCv371557,853,825 - 57,865,849 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361557,847,890 - 57,864,299 (-)NCBIMGSCv36mm8
Celera1559,542,292 - 59,554,316 (-)NCBICelera
Cytogenetic Map15D1NCBI
cM Map1524.23NCBI
C7h8orf76
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8791,448,422 - 91,459,284 (-)NCBIGRCr8
mRatBN7.2789,558,890 - 89,569,810 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl789,558,909 - 89,569,810 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx791,435,855 - 91,446,673 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0793,637,137 - 93,647,955 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0793,455,238 - 93,466,044 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0797,891,723 - 97,902,585 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl797,889,517 - 97,944,151 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0798,498,308 - 98,509,170 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4794,729,977 - 94,740,627 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1794,764,207 - 94,774,857 (-)NCBI
Celera786,331,456 - 86,342,319 (-)NCBICelera
Cytogenetic Map7q33NCBI
CUNH8orf76
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555402,098,032 - 2,115,850 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555402,097,912 - 2,115,921 (-)NCBIChiLan1.0ChiLan1.0
C7H8orf76
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27140,652,426 - 140,675,217 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18116,163,600 - 116,186,387 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08119,915,810 - 119,938,583 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18122,672,133 - 122,695,029 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8122,672,133 - 122,695,029 (-)Ensemblpanpan1.1panPan2
C13H8orf76
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11321,599,283 - 21,619,386 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1321,599,501 - 21,644,897 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1321,564,486 - 21,584,455 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01321,938,854 - 21,958,883 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1321,938,858 - 21,958,835 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11321,667,500 - 21,687,443 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01321,770,140 - 21,790,134 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01322,013,349 - 22,033,352 (-)NCBIUU_Cfam_GSD_1.0
CUNH8orf76
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530316,667,232 - 16,685,628 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647024,093,345 - 24,111,906 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647024,093,346 - 24,110,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C4H8orf76
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl416,137,193 - 16,158,255 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1416,137,177 - 16,161,853 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2416,881,292 - 16,905,699 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH8orf76
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18117,797,430 - 117,820,289 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl8117,797,309 - 117,820,044 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603922,411,683 - 22,434,793 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.






Ensembl Acc Id: ENSHGLT00000026153   ⟹   ENSHGLP00000025924
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462473531,691,316 - 31,708,444 (+)Ensembl
RefSeq Acc Id: XM_004838000   ⟹   XP_004838057
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473531,691,290 - 31,706,981 (+)NCBI
RefSeq Acc Id: XM_004838001   ⟹   XP_004838058
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462473531,691,340 - 31,706,981 (+)NCBI
Protein RefSeqs XP_004838057 (Get FASTA)   NCBI Sequence Viewer  
  XP_004838058 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000025924
  ENSHGLP00000045644
GenBank Protein JAN99234 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004838057   ⟸   XM_004838000
- Peptide Label: isoform X2
- UniProtKB: A0A0P6J6L6 (UniProtKB/TrEMBL),   G5AY85 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004838058   ⟸   XM_004838001
- Peptide Label: isoform X1
- UniProtKB: A0AAX6NVV0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000025924   ⟸   ENSHGLT00000026153



1 to 16 of 16 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSHGLG00000018449 Ensembl, ENTREZGENE
  ENSHGLG00000041473 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000026153 ENTREZGENE
  ENSHGLT00000088807 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/TrEMBL
InterPro DUF5588 UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
KEGG Report hgl:101720594 UniProtKB/TrEMBL
NCBI Gene CUNH8orf76 ENTREZGENE
PANTHER PTHR31919 UniProtKB/TrEMBL
  ZINC FINGERS AND HOMEOBOXES PROTEIN 1, ISOFORM 2 UniProtKB/TrEMBL
Pfam DUF5588 UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/TrEMBL
UniProt A0A0P6J6L6 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6NVV0 ENTREZGENE, UniProtKB/TrEMBL
  G5AY85 ENTREZGENE, UniProtKB/TrEMBL
1 to 16 of 16 rows