Armcx2 (armadillo repeat containing X-linked 2) - Rat Genome Database

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Gene: Armcx2 (armadillo repeat containing X-linked 2) Heterocephalus glaber
Analyze
Symbol: Armcx2
Name: armadillo repeat containing X-linked 2
RGD ID: 18919726
Description: ASSOCIATED WITH autistic disorder (ortholog); autosomal hemophilia A (ortholog); developmental and epileptic encephalopathy 9 (ortholog); FOUND IN mitochondrial outer membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Armadillo repeat-containing X-linked protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624902863,592 - 865,532 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624902861,362 - 865,926 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Armcx2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624902863,592 - 865,532 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624902861,362 - 865,926 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ARMCX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X101,655,281 - 101,659,850 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX101,655,281 - 101,659,850 (-)EnsemblGRCh38hg38GRCh38
GRCh37X100,910,267 - 100,914,835 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X100,796,923 - 100,801,519 (-)NCBINCBI36Build 36hg18NCBI36
CeleraX101,430,845 - 101,435,442 (-)NCBICelera
Cytogenetic MapXq22.1NCBI
HuRefX90,717,786 - 90,722,384 (-)NCBIHuRef
CHM1_1X100,804,126 - 100,808,723 (-)NCBICHM1_1
T2T-CHM13v2.0X100,099,916 - 100,104,489 (-)NCBIT2T-CHM13v2.0
Armcx2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X133,704,891 - 133,709,970 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX133,704,894 - 133,709,970 (-)EnsemblGRCm39 Ensembl
GRCm38X134,804,142 - 134,809,221 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX134,804,145 - 134,809,221 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X131,338,681 - 131,343,760 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X130,150,511 - 130,155,358 (-)NCBIMGSCv36mm8
CeleraX117,689,899 - 117,695,175 (-)NCBICelera
Cytogenetic MapXE3NCBI
cM MapX56.27NCBI
Armcx2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X102,273,915 - 102,278,789 (-)NCBIGRCr8
mRatBN7.2X97,980,662 - 97,985,523 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX97,980,660 - 97,985,552 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX99,654,873 - 99,659,646 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X103,171,433 - 103,176,206 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X100,667,987 - 100,672,760 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X105,617,383 - 105,622,209 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX105,617,385 - 105,622,156 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X105,506,649 - 105,511,422 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X122,260,901 - 122,266,470 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X122,334,335 - 122,339,903 (-)NCBI
CeleraX99,020,283 - 99,025,056 (-)NCBICelera
Cytogenetic MapXq32NCBI
Armcx2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555037,756,429 - 7,758,366 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555037,756,032 - 7,760,573 (-)NCBIChiLan1.0ChiLan1.0
ARMCX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X101,252,466 - 101,257,077 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X101,255,947 - 101,260,684 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X90,855,629 - 90,860,260 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X100,984,392 - 100,988,995 (-)NCBIpanpan1.1PanPan1.1panPan2
ARMCX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X75,517,183 - 75,521,486 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX75,517,407 - 75,519,218 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X76,937,039 - 76,941,529 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX76,937,039 - 76,941,484 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X74,501,328 - 74,505,818 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X76,161,775 - 76,166,267 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X75,924,469 - 75,928,961 (-)NCBIUU_Cfam_GSD_1.0
Armcx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X62,820,100 - 62,825,624 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936813649,468 - 653,615 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936813649,463 - 655,013 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARMCX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX83,213,947 - 83,224,391 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X83,213,939 - 83,218,601 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X97,075,719 - 97,085,641 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARMCX2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X89,972,285 - 89,975,126 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606514,902,697 - 14,907,320 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000028097   ⟹   ENSHGLP00000027820
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624902863,592 - 865,532 (+)Ensembl
RefSeq Acc Id: XM_004872557   ⟹   XP_004872614
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624902861,362 - 865,926 (+)NCBI
RefSeq Acc Id: XM_004872558   ⟹   XP_004872615
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624902861,377 - 865,926 (+)NCBI
RefSeq Acc Id: XM_004872559   ⟹   XP_004872616
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624902861,387 - 865,926 (+)NCBI
RefSeq Acc Id: XM_021250474   ⟹   XP_021106133
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624902861,388 - 865,926 (+)NCBI
RefSeq Acc Id: XM_021250475   ⟹   XP_021106134
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624902861,388 - 865,926 (+)NCBI
RefSeq Acc Id: XM_021250476   ⟹   XP_021106135
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624902861,387 - 865,926 (+)NCBI
RefSeq Acc Id: XM_021250477   ⟹   XP_021106136
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624902861,387 - 865,926 (+)NCBI
RefSeq Acc Id: XP_004872614   ⟸   XM_004872557
- UniProtKB: A0A0N8EUF9 (UniProtKB/TrEMBL),   G5AY33 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004872615   ⟸   XM_004872558
- UniProtKB: A0A0N8EUF9 (UniProtKB/TrEMBL),   G5AY33 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106135   ⟸   XM_021250476
- UniProtKB: A0A0N8EUF9 (UniProtKB/TrEMBL),   G5AY33 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106136   ⟸   XM_021250477
- UniProtKB: A0A0N8EUF9 (UniProtKB/TrEMBL),   G5AY33 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004872616   ⟸   XM_004872559
- UniProtKB: A0A0N8EUF9 (UniProtKB/TrEMBL),   G5AY33 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106133   ⟸   XM_021250474
- UniProtKB: A0A0N8EUF9 (UniProtKB/TrEMBL),   G5AY33 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106134   ⟸   XM_021250475
- UniProtKB: A0A0N8EUF9 (UniProtKB/TrEMBL),   G5AY33 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000027820   ⟸   ENSHGLT00000028097


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000019887 Ensembl, ENTREZGENE
  ENSHGLG00100019534 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000028097 ENTREZGENE
  ENSHGLT00100026891 UniProtKB/TrEMBL
  ENSHGLT00100047362 UniProtKB/TrEMBL
  ENSHGLT00100054609 UniProtKB/TrEMBL
  ENSHGLT00100064185 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-rpt_dom UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  Armadillo UniProtKB/TrEMBL
  Armcx_regulator UniProtKB/TrEMBL
KEGG Report hgl:101709635 UniProtKB/TrEMBL
NCBI Gene Armcx2 ENTREZGENE
PANTHER ARMADILLO REPEAT CONTAINING PROTEIN UniProtKB/TrEMBL
  ARMADILLO REPEAT-CONTAINING X-LINKED PROTEIN 2 UniProtKB/TrEMBL
Pfam Arm_2 UniProtKB/TrEMBL
SMART ARM UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A0N8EUF9 ENTREZGENE, UniProtKB/TrEMBL
  G5AY33 ENTREZGENE, UniProtKB/TrEMBL