Tmem204 (transmembrane protein 204) - Rat Genome Database

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Gene: Tmem204 (transmembrane protein 204) Heterocephalus glaber
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Symbol: Tmem204
Name: transmembrane protein 204
RGD ID: 18915154
Description: INVOLVED IN lymph vessel development (ortholog); regulation of vascular endothelial growth factor receptor signaling pathway (ortholog); smooth muscle cell differentiation (ortholog); ASSOCIATED WITH epilepsy (ortholog); idiopathic generalized epilepsy (ortholog); short-rib thoracic dysplasia 9 with or without polydactyly (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624913666,884 - 693,072 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624913666,884 - 692,476 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Tmem204
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624913666,884 - 693,072 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624913666,884 - 692,476 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
TMEM204
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38161,528,678 - 1,555,568 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl161,528,688 - 1,555,580 (+)EnsemblGRCh38hg38GRCh38
GRCh37161,578,679 - 1,605,569 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36161,524,232 - 1,545,244 (+)NCBINCBI36Build 36hg18NCBI36
Build 34161,523,658 - 1,545,580NCBI
Celera161,796,505 - 1,817,517 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef161,504,212 - 1,531,051 (+)NCBIHuRef
CHM1_1161,578,684 - 1,605,523 (+)NCBICHM1_1
T2T-CHM13v2.0161,543,710 - 1,570,600 (+)NCBIT2T-CHM13v2.0
Tmem204
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391725,276,676 - 25,300,088 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1725,276,676 - 25,302,565 (-)EnsemblGRCm39 Ensembl
GRCm381725,057,702 - 25,081,114 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1725,057,702 - 25,083,591 (-)EnsemblGRCm38mm10GRCm38
MGSCv371725,194,647 - 25,218,059 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361724,785,302 - 24,808,714 (-)NCBIMGSCv36mm8
Celera1725,583,035 - 25,606,020 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.53NCBI
Tmem204
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,581,025 - 14,608,878 (-)NCBIGRCr8
mRatBN7.21014,076,518 - 14,104,849 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1014,076,519 - 14,101,920 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1018,817,294 - 18,842,657 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01018,306,158 - 18,331,521 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,805,377 - 13,830,738 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01014,417,608 - 14,446,272 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1014,417,609 - 14,443,010 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01014,233,030 - 14,258,432 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41014,304,565 - 14,329,967 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11014,304,565 - 14,329,967 (-)NCBI
Celera1013,749,195 - 13,774,597 (-)NCBICelera
Cytogenetic Map10q12NCBI
Tmem204
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,676,155 - 15,701,554 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544215,678,938 - 15,701,554 (-)NCBIChiLan1.0ChiLan1.0
TMEM204
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2181,794,622 - 1,822,669 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1165,580,337 - 5,604,640 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v016152,459 - 178,785 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1161,588,454 - 1,609,649 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl161,588,454 - 1,609,649 (+)Ensemblpanpan1.1panPan2
TMEM204
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1639,274,853 - 39,290,255 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl639,275,373 - 39,289,711 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha640,543,634 - 40,559,084 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0639,621,224 - 39,636,657 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl639,620,716 - 39,636,620 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1639,298,367 - 39,313,817 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0639,270,550 - 39,285,989 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,749,273 - 39,764,718 (-)NCBIUU_Cfam_GSD_1.0
Tmem204
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,306,636 - 104,326,791 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366942,382,662 - 2,402,981 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366942,382,672 - 2,402,798 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM204
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl340,342,961 - 40,355,726 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1340,342,957 - 40,355,887 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2341,806,127 - 41,821,183 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM204
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,443,132 - 1,469,973 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl51,446,321 - 1,472,785 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606829,617,900 - 29,641,656 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000003013   ⟹   ENSHGLP00000002959
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_004624913666,884 - 693,072 (-)Ensembl
RefSeq Acc Id: XM_004873743   ⟹   XP_004873800
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_004624913666,884 - 692,476 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004873800 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000002959
RefSeq Acc Id: XP_004873800   ⟸   XM_004873743
- UniProtKB: A0AAX6QE72 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000002959   ⟸   ENSHGLT00000003013


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000002206 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000003013 ENTREZGENE
NCBI Gene Tmem204 ENTREZGENE
UniProt A0AAX6QE72 ENTREZGENE, UniProtKB/TrEMBL