LOC101716093 (tubulin gamma-1 chain) - Rat Genome Database

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Gene: LOC101716093 (tubulin gamma-1 chain) Heterocephalus glaber
Analyze
Symbol: LOC101716093 (Ensembl: TUBG1)
Name: tubulin gamma-1 chain
RGD ID: 18907445
Description: ENCODES a protein that exhibits GTP binding (inferred); structural constituent of cytoskeleton (inferred); INVOLVED IN cytoplasmic microtubule organization (inferred); meiotic spindle organization (inferred); microtubule nucleation (inferred); FOUND IN centrosome (inferred); cytoplasm (inferred); cytoskeleton (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Tubg1; tubulin, gamma 1
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247951,511,229 - 1,516,070 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247951,511,532 - 1,516,224 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000017747   ⟹   ENSHGLP00000017572
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247951,511,229 - 1,516,070 (-)Ensembl
RefSeq Acc Id: XM_004859318   ⟹   XP_004859375
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247951,511,532 - 1,516,224 (-)NCBI
RefSeq Acc Id: XM_021240281   ⟹   XP_021095940
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247951,511,532 - 1,515,732 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004859375 (Get FASTA)   NCBI Sequence Viewer  
  XP_021095940 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB18369 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000017572
Reference Protein Sequences
RefSeq Acc Id: XP_004859375   ⟸   XM_004859318
- Peptide Label: isoform X1
- UniProtKB: A0A0P6J2G7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021095940   ⟸   XM_021240281
- Peptide Label: isoform X2
RefSeq Acc Id: ENSHGLP00000017572   ⟸   ENSHGLT00000017747


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012574 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000017747 ENTREZGENE
Gene3D-CATH Helix hairpin bin UniProtKB/TrEMBL
  Tubulin/FtsZ, C-terminal domain UniProtKB/TrEMBL
  Tubulin/FtsZ, GTPase domain UniProtKB/TrEMBL
InterPro Gamma_tubulin UniProtKB/TrEMBL
  Tub_FtsZ_C UniProtKB/TrEMBL
  Tubulin UniProtKB/TrEMBL
  Tubulin/FtsZ-like_C UniProtKB/TrEMBL
  Tubulin/FtsZ_2-layer-sand-dom UniProtKB/TrEMBL
  Tubulin/FtsZ_GTPase_sf UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
  Tubulin_CS UniProtKB/TrEMBL
  Tubulin_FtsZ_GTPase UniProtKB/TrEMBL
NCBI Gene LOC101716093 ENTREZGENE
PANTHER TUBULIN UniProtKB/TrEMBL
  TUBULIN GAMMA-2 CHAIN UniProtKB/TrEMBL
Pfam Tubulin UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
PRINTS GAMMATUBULIN UniProtKB/TrEMBL
  TUBULIN UniProtKB/TrEMBL
PROSITE TUBULIN UniProtKB/TrEMBL
SMART Tubulin UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
Superfamily-SCOP Tubulin C-terminal domain-like UniProtKB/TrEMBL
  Tubulin nucleotide-binding domain-like UniProtKB/TrEMBL
UniProt A0A0P6J2G7 ENTREZGENE, UniProtKB/TrEMBL