Fbxl15 (F-box and leucine rich repeat protein 15) - Rat Genome Database

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Gene: Fbxl15 (F-box and leucine rich repeat protein 15) Heterocephalus glaber
Analyze
Symbol: Fbxl15
Name: F-box and leucine rich repeat protein 15
RGD ID: 18905177
Description: INVOLVED IN bone mineralization (ortholog); G2/M transition of mitotic cell cycle (ortholog); positive regulation of BMP signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: F-box/LRR-repeat protein 15
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248311,823,832 - 1,826,646 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248311,823,244 - 1,826,646 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Fbxl15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248311,823,832 - 1,826,646 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248311,823,244 - 1,826,646 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
FBXL15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810102,420,836 - 102,423,136 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10102,419,189 - 102,423,136 (+)EnsemblGRCh38hg38GRCh38
GRCh3710104,180,593 - 104,182,893 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610104,169,579 - 104,172,883 (+)NCBINCBI36Build 36hg18NCBI36
Celera1097,920,469 - 97,923,791 (+)NCBICelera
Cytogenetic Map10q24.32NCBI
HuRef1097,812,755 - 97,816,077 (+)NCBIHuRef
CHM1_110104,463,009 - 104,466,331 (+)NCBICHM1_1
T2T-CHM13v2.010103,304,934 - 103,308,100 (+)NCBIT2T-CHM13v2.0
Fbxl15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391946,316,623 - 46,318,885 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1946,316,623 - 46,318,885 (+)EnsemblGRCm39 Ensembl
GRCm381946,328,184 - 46,330,446 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1946,328,184 - 46,330,446 (+)EnsemblGRCm38mm10GRCm38
MGSCv371946,402,674 - 46,404,936 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361946,381,520 - 46,383,756 (+)NCBIMGSCv36mm8
Celera1947,091,576 - 47,093,839 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1938.81NCBI
Fbxl15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81255,131,154 - 255,133,395 (+)NCBIGRCr8
mRatBN7.21245,189,732 - 245,191,973 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1245,189,736 - 245,192,007 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1253,311,146 - 253,313,387 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01260,005,828 - 260,008,069 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01252,657,581 - 252,659,822 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01266,075,782 - 266,078,023 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1266,075,782 - 266,078,023 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01273,506,723 - 273,508,964 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41251,544,341 - 251,546,582 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11251,807,434 - 251,809,691 (+)NCBI
Celera1240,972,506 - 240,974,747 (+)NCBICelera
Cytogenetic Map1q54NCBI
Fbxl15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554857,977,318 - 7,978,983 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554857,977,222 - 7,979,246 (-)NCBIChiLan1.0ChiLan1.0
FBXL15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28114,306,739 - 114,310,633 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110114,312,054 - 114,315,957 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01099,022,732 - 99,026,623 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110102,488,353 - 102,492,301 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10102,485,732 - 102,492,301 (+)Ensemblpanpan1.1panPan2
FBXL15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12814,927,740 - 14,929,867 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2814,927,532 - 14,929,863 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2815,092,779 - 15,102,210 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02815,394,448 - 15,403,881 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2815,401,526 - 15,403,878 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12814,939,491 - 14,948,923 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02814,978,589 - 14,988,023 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02815,111,205 - 15,120,640 (+)NCBIUU_Cfam_GSD_1.0
Fbxl15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721331,842,615 - 31,847,211 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366003,442,778 - 3,448,467 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366003,445,840 - 3,450,369 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FBXL15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14113,430,401 - 113,434,347 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114113,430,169 - 113,434,345 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
FBXL15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1995,450,709 - 95,454,830 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl995,452,809 - 95,459,661 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604856,556,636 - 56,560,591 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000003907   ⟹   ENSHGLP00000003849
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248311,823,832 - 1,826,646 (+)Ensembl
RefSeq Acc Id: XM_013066133   ⟹   XP_012921587
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,357 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_013066134   ⟹   XP_012921588
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,357 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_021245676   ⟹   XP_021101335
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,708 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_021245677   ⟹   XP_021101336
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,357 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_021245678   ⟹   XP_021101337
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,728 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_021245679   ⟹   XP_021101338
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,244 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_021245680   ⟹   XP_021101339
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,357 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_021245681   ⟹   XP_021101340
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,357 - 1,826,646 (+)NCBI
RefSeq Acc Id: XM_021245682   ⟹   XP_021101341
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248311,823,357 - 1,826,646 (+)NCBI
RefSeq Acc Id: XP_021101338   ⟸   XM_021245679
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021101339   ⟸   XM_021245680
- Peptide Label: isoform X1
RefSeq Acc Id: XP_012921587   ⟸   XM_013066133
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021101341   ⟸   XM_021245682
- Peptide Label: isoform X1
RefSeq Acc Id: XP_012921588   ⟸   XM_013066134
- Peptide Label: isoform X2
RefSeq Acc Id: XP_021101340   ⟸   XM_021245681
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021101336   ⟸   XM_021245677
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021101335   ⟸   XM_021245676
- Peptide Label: isoform X1
RefSeq Acc Id: XP_021101337   ⟸   XM_021245678
- Peptide Label: isoform X1
Ensembl Acc Id: ENSHGLP00000003849   ⟸   ENSHGLT00000003907


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000002839 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000003907 ENTREZGENE
NCBI Gene Fbxl15 ENTREZGENE
UniProt A0AAX6QK56_HETGA UniProtKB/TrEMBL
  A0AAX6RYW1_HETGA UniProtKB/TrEMBL