LOC101702732 (olfactory receptor 4E2) - Rat Genome Database

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Gene: LOC101702732 (olfactory receptor 4E2) Heterocephalus glaber
Analyze
Symbol: LOC101702732
Name: olfactory receptor 4E2
RGD ID: 18903857
Description: ENCODES a protein that exhibits copper ion binding (inferred); G protein-coupled receptor activity (inferred); odorant binding (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception (inferred); detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248257,646,103 - 7,647,044 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074  


Genomics

Comparative Map Data
LOC101702732
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248257,646,103 - 7,647,044 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
OR4E2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381421,653,835 - 21,667,642 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1421,653,835 - 21,667,642 (+)EnsemblGRCh38hg38GRCh38
GRCh371422,122,051 - 22,135,856 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361421,203,137 - 21,204,078 (+)NCBINCBI36Build 36hg18NCBI36
Build 341421,203,136 - 21,204,078NCBI
Celera141,996,670 - 1,997,611 (+)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef142,251,000 - 2,251,941 (+)NCBIHuRef
CHM1_11422,132,985 - 22,133,926 (+)NCBICHM1_1
T2T-CHM13v2.01415,851,493 - 15,865,307 (+)NCBIT2T-CHM13v2.0
Or4e2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391452,687,850 - 52,688,859 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1452,680,447 - 52,690,031 (+)EnsemblGRCm39 Ensembl
GRCm381452,450,393 - 52,451,402 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1452,442,990 - 52,452,574 (+)EnsemblGRCm38mm10GRCm38
MGSCv371453,070,068 - 53,071,077 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361451,372,366 - 51,373,292 (+)NCBIMGSCv36mm8
Celera1449,441,578 - 49,442,587 (+)NCBICelera
Cytogenetic Map14C2NCBI
cM Map1426.95NCBI
Or4e2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81527,661,127 - 27,662,053 (+)NCBIGRCr8
mRatBN7.21525,187,633 - 25,188,559 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1525,179,800 - 25,191,297 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1527,958,514 - 27,959,440 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01528,914,407 - 28,915,333 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01527,167,349 - 27,168,275 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01528,894,627 - 28,895,553 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1528,894,627 - 28,895,553 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01532,725,888 - 32,726,814 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41527,928,940 - 27,929,866 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11527,944,639 - 27,945,566 (+)NCBI
Celera1525,487,893 - 25,488,819 (+)NCBICelera
Cytogenetic Map15p14NCBI
LOC102015989
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555502,352,164 - 2,353,090 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555502,352,164 - 2,353,090 (+)NCBIChiLan1.0ChiLan1.0
LOC100980776
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21523,108,915 - 23,122,545 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11422,325,401 - 22,339,031 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0142,474,364 - 2,475,305 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11420,591,011 - 20,591,952 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1420,591,011 - 20,591,952 (+)Ensemblpanpan1.1panPan2
OR4H12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11517,321,371 - 17,322,875 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1517,321,380 - 17,322,309 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1517,782,171 - 17,783,019 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01517,576,432 - 17,577,362 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11517,261,551 - 17,262,480 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01517,313,717 - 17,314,646 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01517,441,528 - 17,442,457 (-)NCBIUU_Cfam_GSD_1.0
LOC101974914
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864032,869,625 - 32,870,551 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936976415,720 - 416,646 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936976415,720 - 416,646 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100510915
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl777,528,181 - 77,529,122 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1777,528,181 - 77,529,122 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2782,869,105 - 82,870,046 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103231435
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12922,087,016 - 22,089,274 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2922,087,726 - 22,088,667 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605924,334,806 - 24,336,394 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004865057   ⟹   XP_004865114
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248257,646,103 - 7,647,044 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004865114 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB08155 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004865114   ⟸   XM_004865057
- UniProtKB: G5BFU4 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_Receptors UniProtKB/TrEMBL
KEGG Report hgl:101702732 UniProtKB/TrEMBL
NCBI Gene LOC101702732 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt G5BFU4 ENTREZGENE, UniProtKB/TrEMBL