LOC101715891 (regenerating islet-derived protein 3-beta-like) - Rat Genome Database

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Gene: LOC101715891 (regenerating islet-derived protein 3-beta-like) Heterocephalus glaber
Analyze
Symbol: LOC101715891 (Ensembl: REG3G)
Name: regenerating islet-derived protein 3-beta-like
RGD ID: 18903532
Description: ENCODES a protein that exhibits carbohydrate binding (inferred); oligosaccharide binding (inferred); peptidoglycan binding (inferred); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (inferred); disruption of cell wall in another organism (inferred); positive regulation of cell population proliferation (inferred); FOUND IN collagen-containing extracellular matrix (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: REG3G; regenerating islet-derived protein 3-gamma
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474923,957,734 - 23,960,473 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474923,957,732 - 23,960,370 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000011357   ⟹   ENSHGLP00000011232
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462474923,957,734 - 23,960,473 (+)Ensembl
RefSeq Acc Id: XM_004844639   ⟹   XP_004844696
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474923,957,732 - 23,960,370 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004844696 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000011232
  ENSHGLP00100060586
GenBank Protein JAO03589 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004844696   ⟸   XM_004844639
- UniProtKB: A0A0P6JYQ3 (UniProtKB/TrEMBL),   G5BWU5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000011232   ⟸   ENSHGLT00000011357


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008059 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSHGLG00100015238 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000011357 ENTREZGENE, UniProtKB/TrEMBL
  ENSHGLT00100049867 UniProtKB/TrEMBL
Gene3D-CATH 3.10.100.10 UniProtKB/TrEMBL
InterPro C-type_lectin-like UniProtKB/TrEMBL
  C-type_lectin-like/link_sf UniProtKB/TrEMBL
  C-type_lectin_CS UniProtKB/TrEMBL
  CTDL_fold UniProtKB/TrEMBL
KEGG Report hgl:101715891 UniProtKB/TrEMBL
NCBI Gene LOC101715891 ENTREZGENE
PANTHER MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED UniProtKB/TrEMBL
  REGENERATING ISLET-DERIVED PROTEIN 3-GAMMA UniProtKB/TrEMBL
Pfam Lectin_C UniProtKB/TrEMBL
PRINTS PNCREATITSAP UniProtKB/TrEMBL
PROSITE C_TYPE_LECTIN_1 UniProtKB/TrEMBL
  C_TYPE_LECTIN_2 UniProtKB/TrEMBL
SMART CLECT UniProtKB/TrEMBL
Superfamily-SCOP SSF56436 UniProtKB/TrEMBL
UniProt A0A0P6JYQ3 ENTREZGENE, UniProtKB/TrEMBL
  G5BWU5 ENTREZGENE, UniProtKB/TrEMBL