LOC101704936 (cornulin) - Rat Genome Database

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Pathways
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Gene: LOC101704936 (cornulin) Heterocephalus glaber
Analyze
Symbol: LOC101704936
Name: cornulin
RGD ID: 18900160
Description: ENCODES a protein that exhibits calcium ion binding (inferred); calcium-dependent protein binding (inferred); metal ion binding (inferred); INVOLVED IN cell-cell adhesion (inferred); cellular response to cytokine stimulus (inferred); positive regulation of cell cycle G1/S phase transition (inferred); FOUND IN cytoplasm (inferred); extracellular space (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Crnn
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477219,990,245 - 19,994,732 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004854114   ⟹   XP_004854171
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477219,990,245 - 19,994,732 (-)NCBI
RefSeq Acc Id: XM_021265970   ⟹   XP_021121629
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477219,990,245 - 19,994,732 (-)NCBI
RefSeq Acc Id: XM_021265971   ⟹   XP_021121630
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477219,990,245 - 19,994,690 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004854171 (Get FASTA)   NCBI Sequence Viewer  
  XP_021121629 (Get FASTA)   NCBI Sequence Viewer  
  XP_021121630 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000045314
Reference Protein Sequences
RefSeq Acc Id: XP_004854171   ⟸   XM_004854114
- Peptide Label: isoform X2
- UniProtKB: G5B8J7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121629   ⟸   XM_021265970
- Peptide Label: isoform X1
- UniProtKB: G5B8J7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121630   ⟸   XM_021265971
- Peptide Label: isoform X1
- UniProtKB: G5B8J7 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000038619 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000084414 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  S-100_dom UniProtKB/TrEMBL
  S100_Ca-bd_sub UniProtKB/TrEMBL
NCBI Gene LOC101704936 ENTREZGENE
PANTHER CORNULIN UniProtKB/TrEMBL
  S100 CALCIUM-BINDING PROTEIN UniProtKB/TrEMBL
Pfam S_100 UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
SMART S_100 UniProtKB/TrEMBL
Superfamily-SCOP EF-hand UniProtKB/TrEMBL
UniProt G5B8J7 ENTREZGENE, UniProtKB/TrEMBL