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Gene: MRPL24 (mitochondrial ribosomal protein L24) Chlorocebus sabaeus

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Symbol:

MRPL24

Name:

mitochondrial ribosomal protein L24

RGD ID:

18792926

Description:

ENCODES a protein that exhibits RNA binding (inferred); structural constituent of ribosome (inferred); INVOLVED IN translation (inferred); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); gastrointestinal stromal tumor (ortholog); immunodeficiency 42 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

39S ribosomal protein L24, mitochondrial

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	7,123,524 - 7,127,531 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	6,417,002 - 6,420,991 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 2 (ISO)

gastrointestinal stromal tumor (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

translation (IEA)

Cellular Component

mitochondrial large ribosomal subunit (ISO)

mitochondrion (ISO)

ribonucleoprotein complex (IEA)

ribosome (IEA)

Molecular Function

RNA binding (IEA)

structural constituent of ribosome (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

MRPL24
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	7,123,524 - 7,127,531 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	6,417,002 - 6,420,991 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

MRPL24
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	156,737,303 - 156,742,716 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	156,737,303 - 156,741,590 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	156,707,095 - 156,710,880 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	154,973,718 - 154,977,547 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	153,520,166 - 153,523,996	NCBI
Celera	1	129,778,326 - 129,782,155 (-)	NCBI		Celera
Cytogenetic Map	1	q23.1	NCBI
HuRef	1	128,064,919 - 128,068,748 (-)	NCBI		HuRef
CHM1_1	1	158,103,295 - 158,107,124 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	155,874,136 - 155,878,130 (-)	NCBI		T2T-CHM13v2.0

Mrpl24
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	87,825,438 - 87,830,757 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	87,826,813 - 87,830,979 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	87,918,131 - 87,923,450 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	87,919,506 - 87,923,672 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	87,723,466 - 87,727,355 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	88,005,471 - 88,009,591 (+)	NCBI		MGSCv36	mm8
Celera	3	87,956,820 - 87,961,046 (+)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	38.78	NCBI

mrpl24
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	175,680,872 - 175,687,107 (+)	NCBI		GRCr8
mRatBN7.2	2	173,383,062 - 173,389,249 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	173,383,224 - 173,389,248 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	180,527,985 - 180,534,021 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	178,550,341 - 178,556,377 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	173,150,341 - 173,156,478 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	187,288,460 - 187,294,676 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	187,288,644 - 187,294,656 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	206,691,490 - 206,697,693 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	179,995,713 - 180,001,745 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	179,945,818 - 179,951,831 (+)	NCBI
Celera	2	167,332,436 - 167,338,455 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Mrpl24
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	2,814,358 - 2,818,648 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	2,814,358 - 2,818,648 (-)	NCBI	ChiLan1.0	ChiLan1.0

MRPL24
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	93,103,221 - 93,107,491 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	92,837,725 - 92,841,995 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	132,080,651 - 132,084,541 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	135,902,324 - 135,906,220 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	135,902,324 - 135,906,245 (-)	Ensembl	panpan1.1		panPan2

MRPL24
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	41,248,851 - 41,251,878 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	41,249,992 - 41,251,879 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	40,735,743 - 40,739,465 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	41,111,421 - 41,115,290 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	41,111,502 - 41,115,269 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	40,893,389 - 40,897,248 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	40,946,348 - 40,950,179 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	41,230,010 - 41,233,879 (+)	NCBI		UU_Cfam_GSD_1.0

Mrpl24
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	26,862,586 - 26,867,243 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936580	5,892,964 - 5,897,602 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MRPL24
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	93,353,111 - 93,357,796 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	93,352,997 - 93,357,805 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	101,924,628 - 101,929,445 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Mrpl24
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	1,893,771 - 1,899,617 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624885	1,893,771 - 1,899,244 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MRPL24
59 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

hemolymphoid system	mesenchyme	mesoderm
7	7	7

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007976716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007976719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_007976716 ⟹ XP_007974907

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	7,123,524 - 7,127,531 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	6,417,002 - 6,420,991 (+)	NCBI

Sequence:

show sequence

GATTCCCAACATGCTTCATGGTGTGTTTTGGTTTCCTTGATTTCCTACCCCGCCAAACTTCCTG
TTTCCAGCTTTCTAGCGGCGGACTGCAACTCCCAGCATGCTGAGAGATCAGATTCGTGGTTGAG
CTGCCGTTTTACACTTGGACTACATCTCCCACAAAGTCGACGGGCGTGGCAGGGGAGGGGACGC
TGAGGGCCCATGTGCTGAGCAGCCGAAGTGCCACGGAAAGTGGAGGTGAGGGCCACCCGCCCCG
GAGGTGCTCGTTCGAGAGGCAGAGCTGACAAGGAAGATTTCTGAGCATTTTGCTGGCAAAGGGA
TTTCTTACAGCCTCCAGGCATGCGTCTTTCTGCCCTGCTGGCCTTGGCATCCAAGGTCACTCTG
CCCCCCAATTACTGCTATGGGATGAGCCCCCCAGGCTCCTCGGCAGACAAAAGGAAGAACGCCC
CATGGAGCAGGCGGCGCCCAGTGGTTGTGGAACCCATCTCTGATGAAGACTGGTATCTGTTCTG
TGGGGACACGGTGGAGATCCTAGAAGGCAAGGATGCTGGAAAGCAGGGCAAAGTGGTTCAAGTT
ATCCGGCAGCAAAACTGCGTGGTCGTGGGAGGGCTGAACACATATTACCGCTACATTGGCAAGA
CCATGGATTACCGAGGAACCATGATCCCTAGTGAAGCCCCCTTGCTCCACCGCCAGGTCAAACT
TGTGGATCCTATGGACAGGAAACCCACTGAGATTGAGTGGAGATATACTGAAGCAGGAGAGCGG
GTACGAGTCTCCACACGATCAGGGAGAATTATCCCTAAACCCGACTTTCCCAGAGCTGATGGCA
TCGTCCCTGAAACATGGATTGATGGCCCCAAAGACACATCAGTGGAAGATGCTTTAGAAAGAAC
CTACGTGCCCCGTCTAAAGACACTACAGGAGGAGGTGATGGAGGCCATGGGGATCAAGGAGACT
CGGAAATACAAGAAGGTCTATTGGTATTGAGCCCAGGGACAGCACCTCCTCCCCAACTTCTGTC
CCAGCCTTGAAGGCTGAGGCACCTCTTTTTCAGATGCCAATAAAGAGCAGTTTATGAGTCCTGT
G

hide sequence

RefSeq Acc Id:

XM_007976719 ⟹ XP_007974910

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	20	7,123,524 - 7,127,531 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	6,417,002 - 6,420,991 (+)	NCBI

Sequence:

show sequence

GATTCCCAACATGCTTCATGGTGTGTTTTGGTTTCCTTGATTTCCTACCCCGCCAAACTTCCTG
TTTCCAGCTTTCTAGCGGCGGACTGCAACTCCCAGCATGCTGAGAGATCAGATTCGTGGTTGAG
CTGCCGTTTTACACTTGGACTACATCTCCCACAAAGTCGACGGGCGTGGCAGGGGAGGGGACGC
TGAGGGCCCATGTGCTGAGCAGCCGAAGTGCCACGGAAAGTGGAGAGCTGACAAGGAAGATTTC
TGAGCATTTTGCTGGCAAAGGGATTTCTTACAGCCTCCAGGCATGCGTCTTTCTGCCCTGCTGG
CCTTGGCATCCAAGGTCACTCTGCCCCCCAATTACTGCTATGGGATGAGCCCCCCAGGCTCCTC
GGCAGACAAAAGGAAGAACGCCCCATGGAGCAGGCGGCGCCCAGTGGTTGTGGAACCCATCTCT
GATGAAGACTGGTATCTGTTCTGTGGGGACACGGTGGAGATCCTAGAAGGCAAGGATGCTGGAA
AGCAGGGCAAAGTGGTTCAAGTTATCCGGCAGCAAAACTGCGTGGTCGTGGGAGGGCTGAACAC
ATATTACCGCTACATTGGCAAGACCATGGATTACCGAGGAACCATGATCCCTAGTGAAGCCCCC
TTGCTCCACCGCCAGGTCAAACTTGTGGATCCTATGGACAGGAAACCCACTGAGATTGAGTGGA
GATATACTGAAGCAGGAGAGCGGGTACGAGTCTCCACACGATCAGGGAGAATTATCCCTAAACC
CGACTTTCCCAGAGCTGATGGCATCGTCCCTGAAACATGGATTGATGGCCCCAAAGACACATCA
GTGGAAGATGCTTTAGAAAGAACCTACGTGCCCCGTCTAAAGACACTACAGGAGGAGGTGATGG
AGGCCATGGGGATCAAGGAGACTCGGAAATACAAGAAGGTCTATTGGTATTGAGCCCAGGGACA
GCACCTCCTCCCCAACTTCTGTCCCAGCCTTGAAGGCTGAGGCACCTCTTTTTCAGATGCCAAT
AAAGAGCAGTTTATGAGTCCTGTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_007974907	(Get FASTA)	NCBI Sequence Viewer
	XP_007974910	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000015855
	ENSCSAP00000015855.1

RefSeq Acc Id:	XP_007974907 ⟸ XM_007976716
- UniProtKB:	A0A0D9S4R6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007974910 ⟸ XM_007976719
- UniProtKB:	A0A0D9S4R6 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000002184	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000000198.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.30.30	UniProtKB/TrEMBL
InterPro	KOW	UniProtKB/TrEMBL
	KOW_RPL26/RPL24	UniProtKB/TrEMBL
	Rib_L2_dom2	UniProtKB/TrEMBL
	Ribosomal_L24	UniProtKB/TrEMBL
	Ribosomal_L24/26_CS	UniProtKB/TrEMBL
	Translation_prot_SH3-like_sf	UniProtKB/TrEMBL
NCBI Gene	MRPL24	ENTREZGENE
PANTHER	39S RIBOSOMAL PROTEIN L24, MITOCHONDRIAL	UniProtKB/TrEMBL
	PTHR12903	UniProtKB/TrEMBL
Pfam	KOW	UniProtKB/TrEMBL
	ribosomal_L24	UniProtKB/TrEMBL
PROSITE	RIBOSOMAL_L24	UniProtKB/TrEMBL
SMART	KOW	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50104	UniProtKB/TrEMBL
UniProt	A0A0D9S4R6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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