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Gene: SWAP70 (switching B cell complex subunit SWAP70) Chlorocebus sabaeus

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Symbol:

SWAP70

Name:

switching B cell complex subunit SWAP70

RGD ID:

18595992

Description:

ENCODES a protein that exhibits ATP binding (inferred); calcium ion binding (inferred); DNA binding (inferred); INVOLVED IN isotype switching (ortholog); somatic cell DNA recombination (ortholog); FOUND IN postsynapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

SWAP switching B-cell complex 70kDa subunit; SWAP switching B-cell complex subunit 70; switch-associated protein 70

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	55,074,255 - 55,156,632 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	55,074,209 - 55,156,599 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	152,743,559 - 152,825,970 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament bundle assembly (IEA)

isotype switching (IEA,ISO)

negative regulation of actin filament depolymerization (IEA)

negative regulation of cell-cell adhesion mediated by integrin (IEA)

positive regulation of actin filament bundle assembly (IEA)

positive regulation of cytosolic calcium ion concentration (IEA)

positive regulation of mast cell chemotaxis (IEA)

regulation of actin polymerization or depolymerization (IEA)

regulation of protein localization (IEA)

somatic cell DNA recombination (IEA,ISO)

Cellular Component

actin cytoskeleton (IEA)

cytoplasm (IEA)

nucleus (IEA)

plasma membrane (IEA)

postsynapse (IEA,ISO)

Molecular Function

ATP binding (IEA)

calcium ion binding (IEA)

DNA binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SWAP70
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	55,074,255 - 55,156,632 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	55,074,209 - 55,156,599 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	152,743,559 - 152,825,970 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

SWAP70
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	9,664,077 - 9,752,993 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	9,664,077 - 9,752,993 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	9,685,624 - 9,774,540 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	9,642,204 - 9,731,084 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	9,807,053 - 9,895,904 (+)	NCBI		Celera
Cytogenetic Map	11	p15.4	NCBI
HuRef	11	9,358,037 - 9,447,124 (+)	NCBI		HuRef
CHM1_1	11	9,684,542 - 9,773,826 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	9,748,230 - 9,837,705 (+)	NCBI		T2T-CHM13v2.0

Swap70
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	109,820,890 - 109,882,720 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	109,820,918 - 109,882,713 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	110,221,703 - 110,283,506 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	110,221,711 - 110,283,506 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	117,365,217 - 117,427,020 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	110,012,938 - 110,074,683 (+)	NCBI		MGSCv36	mm8
Celera	7	110,195,562 - 110,257,450 (+)	NCBI		Celera
Cytogenetic Map	7	E3	NCBI
cM Map	7	57.7	NCBI

Swap70
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	173,702,338 - 173,763,540 (+)	NCBI		GRCr8
mRatBN7.2	1	164,267,588 - 164,328,796 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	164,267,609 - 164,328,794 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	172,603,358 - 172,665,090 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	179,789,367 - 179,851,105 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	172,472,346 - 172,533,771 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	174,862,683 - 174,924,101 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	174,862,698 - 174,924,078 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	181,861,305 - 181,922,718 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	167,888,783 - 167,949,621 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	167,997,687 - 168,060,352 (+)	NCBI
Celera	1	162,163,699 - 162,224,817 (+)	NCBI		Celera
Cytogenetic Map	1	q33	NCBI

Swap70
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	25,385,007 - 25,444,913 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955414	25,385,648 - 25,444,743 (+)	NCBI	ChiLan1.0	ChiLan1.0

SWAP70
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	12,103,814 - 12,191,319 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	12,064,725 - 12,151,073 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	9,797,024 - 9,883,400 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	9,526,752 - 9,614,422 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	9,526,752 - 9,614,422 (+)	Ensembl	panpan1.1		panPan2

SWAP70
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	32,910,547 - 32,985,617 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	32,910,563 - 32,984,580 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	32,477,609 - 32,552,729 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	33,789,271 - 33,864,658 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	33,789,277 - 33,868,168 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	33,051,982 - 33,126,781 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	33,218,939 - 33,294,118 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	33,512,810 - 33,588,175 (+)	NCBI		UU_Cfam_GSD_1.0

Swap70
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	52,407,557 - 52,477,400 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936528	8,441,527 - 8,511,376 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936528	8,441,839 - 8,511,374 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SWAP70
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	49,719,669 - 49,805,049 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	49,721,120 - 49,805,262 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	53,070,345 - 53,154,129 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Swap70
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	1,794,530 - 1,885,472 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	1,794,430 - 1,887,927 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SWAP70
1324 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008007177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008007183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037997546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000002567 ⟹ ENSCSAP00000000871

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	1	55,074,209 - 55,156,599 (-)	Ensembl

RefSeq Acc Id:

XM_008007177 ⟹ XP_008005368

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	55,074,255 - 55,156,632 (-)	NCBI
Vero_WHO_p1.0	NW_023666038	152,743,559 - 152,825,969 (-)	NCBI

Sequence:

show sequence

CGCGGCGGGCGGCGGACGCGGAGGCTGAGGGGCGTTCGAGGCGCCGAGGGGCTGGCTGGGCCCG
AGGGGTTGGTGGGGCAGCAGGGTCGCGGCCATGGGGAGCTTGAAGGACGAGCTGCTCAAAGCCA
TATGGCACGCCTTCACCGCACTCGACCAGGACCATAGCGGCAAGGTCTCCAAGTCCCAGCTCAA
GGTCCTTTCCCATAACTTGTGCACGGTGCTGAAGGTTCCTCATGACCCGGTTGCCCTTGAAGAG
CACTTCAGGGATGATGATGAGGGGCCAGTGTCCAACCAGGGCTACATGCCTTATTTAAACAGGT
TCATTTTGGAAAAGGTCCAAGACAACTTTGACAAGATTGAATTCAATAGGATGTGTTGGACCCT
ATGTGTCAAAAAAAACCTCACAAAGAATCCCCTGCTCATTACAGAAGAAGATGCATTTAAAGTA
TGGGTTATTTTCAACTTTTTATCTGAGGACAAGTATCCACTAATTATTGTGTCAGAAGAGATTG
AATACCTGCTTAAGAAGCTTACAGAAGCTATGGGAGGAGGCTGGCAGCAAGAACAATTTGAACA
TTATAAAATCAACTTTGATGACAGTAAAAATGGCCTTTCTGCGTGGGAACTTATTGAGCTTATT
GGAAATGGACAGTTTAGCAAAGGCATGGATCGGCAGACTGTGTCTATGGCAATTAATGAAGTCT
TTAATGAACTTATATTAGATGTGTTAAAACAGGGTTACATGATGAAAAAGGGCCACAGACGGAA
AAACTGGACTGAACGATGGTTTGTACTAAAGCCGAACATAATTTCTTACTATGTGAGTGAGGAT
CTGAAAGATAAGAAAGGAGACATTCTCTTAGATGAAAATTGCTGTGTAGAGTCCTTGCCTGACA
AAGATGGAAAGAAATGCCTTTTTCTCGTAAAATGTTTTGATAAGACTTTTGAAATCAGTGCTTC
AGATAAGAAGAAGAAACAGGAGTGGATTCAAGCCATTCATTCTACTATTCATCTGTTGAAGCTG
GGCAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAGCTGG
CTGAACAAGAGGAACTGGAGCGACAAATGAAGGAGCTCCAGGTTGCCAACGAAAGCAAGCAACA
GGAGCTGGAGGCTGTGCGGAAGAAACTGGAGGAAGCAGCATCTCGTGCAGCAGAAGAGGAAAAG
AAACGCCTTCAGACTCAAGTGGAACTTCAGGCCAGGTTCAGCACAGAGCTGGAAAGAGAGAAGC
TTATCAGACAGCAGATGGAAGAACAGGTTGCCCAAAAGTCCTCTGAACTGGAACAGTATTTACA
GCGAGTACGGGAGCTGGAAGACATGTACCTAAAGCTGCAGGAGGCTCTCGAAGATGAGAGACAG
GCCCGGCAAGATGAAGAAACGGTGCGGAAGCTTCAGGCCAGGTTATTGGAGGAAGAGTCTTCCA
AGAGGGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCATTCAGACAACTGAGGCGGA
GAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGGAACAGGCCCTGCAGGAGGCCATGGAGCAG
CTGGAGCAGCTTGAGTTAGAACGGAAACAAGCACTTGAGCAGTATGAGGAAGTTAAAAAGAAGC
TGGAGATGGCAACTGATAAGACCAAGAGCTGGAAGGACAAAGTGGCCCATCATGAAGGATTAAT
TCGACTGATAGAACCAGGTTCAAAGAACCCTCACCTGATCACTAACTGGGGACCTGCAGCTTTC
ACTGAGGCAGAACTTGAAGAGAGAGAGAAGAACTGGAAAGAGAAAAAGACCACGGAGTGACCGA
GCTTGCTGGCAGTCACATCAGTTATGTAGATACTGCATGGCAGGAGAGCTTTATGCTAAAGACA
AAAGAAATGGCTTTGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC
CGAGGTGGGTGGATCACCTGAGTTCAAGACCAGCCTGGCCAACCTGGTGAAACCCCGTCTCTAC
TAAAAATACAAAAAAAAATTAGCTGGGCGTAGTGGTGGGCGCCTGTAATCCCAGCTACTTGGGA
GGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGCAGGTTGCAGTGAGCTGAGATCATGCCA
TTGTACTGCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAACACCGG
CTTTGCTGCTTTTAACTGTTCTTCCTTCCATGCCTCTCCAAGTGGGTCAATATCCTAAGGAAGC
CTTCTTATTTATCTTCCTGCAAACAAGGGCTACCTGAAAAGAGAGAGGAAAAAAAAAAGTCAAC
ATTGTCAAGCTGTTTATTTACTCTTTCTTTGAAAACATCACCTTCTGAAATTTGTCTTTTAGCT
CTCTCAGATTCTTCCCCAAATGAGGCAGGGTGCAGACAGCACAGTCAGCTCTGCAGAGTTTGGA
GCGGCTCACTGCCATTGGGTACTCAGAACCCTGTGGACTGGATGTTAGCTCTTTCCTTTGGCAG
CGTGTTTCCTTTGTTTCCTTCTCTGAGTATGTGCTGTTAAACTAGATTGGCCAGTTTGCTTTCC
ATTCCCTGACACTTGGCCTTTGACTATTGGTGCTCTGACAGAGAAGTCACGGAGTCACTGCCAT
TTCCTGGTTGCCCTTTTGGAATGTAATCCTGTTAGTAGAGGTTTTCTAGCTTCTGCTAAGATAT
TTCTTTCCCTAACCATCATACATTTGGCATGTTTCATTCCCATCTCCTTTCCCCTCACCTTAAA
GGAGGCTACCCCTTTGCCCCCTATTGTCAACCTAATTTTCTTTCGTCCTCTCTCATTGAATGAT
GTGCTACCAGGTATATGCCAGGCTGTGAGAGGATTATGCTGAGTAGTAGAAAGAAGCTAATTTG
AAATAAAAATTATTTGGATCATAAAGAAAGCAGATGAGATTTGGCACATGGCCAACAGGAAGTT
GACTGTATGTCTGCTAGTTAGATTCAAAACATCATAAAGATGATAGCATGTCAATATATTAGCC
CAGCCATAATGTTAGCCTTTGTTAGGTGGGCAGCTTTTCTGCCTTTTCCCTTCCTCTATAGTGA
CAACAGAGAAAATATCTAATAGAAATAAGTGTAACAGGGAAATTGGGATCATAGTTTATATGCA
TCTGATTTGAAAGGAGTATTAAGGAAGGTTTTCTATCTATCTTTAGATTAAAAAGAACATTTAT
GAAATCAAGCCTTCTAACACTAGTTATTATTGAGAAGCAACAGTAACTCCATGGACAGCAATCA
AGCTTAAAATTGTAAATAAATATGAGGATAATTCAGTTGTTGCAAAAAAGGGCAGAATTCAGTA
GAATAAAGTCCTTTTCTCTCTATAAGTATTAAATGAGGACAGAGAACCACAGGTGTTCAACCTC
AGTGCTTGCTGAGTGCATACTAAGAAAGCAATTCCAAACAGATGTATACATCGAGAGAGAGTGG
TATTAGAGGTTTCAGTGTATGTATTTATTTACATGAGAGGAAACTGGAATATAATCCCATAAAT
TATCACCTTTTACGACTGGAAAATATTTGCCAATGAAGAAATGCTCTGTAGGTATTTGTGTTAA
GATTTTGGGCTGTTTAATAAAAATGTAACTTTATTTAATGATTTCTTATAGTTGCCTTTATAAA
GTTTATTGTCTAAAATATTTTTGTATCATGTGCCTTTGAAATTTGCCAGCTGATTTCTGCCCAG
ACATTTATCAGTATTAGCATTTTATTCAGTAGCTGGCAGGTGTATAGACCAACGAGACTTAGGT
AAGGAATGGAACCTTTCCTGTGGTTTGATTGCACATTACACCAGAAGACTCCAGTATCCGGCAT
TCCAGAATGAGGAAAAAGTATTTTGCAAAGAACCTAGTCACCTATGTGAAATCTATGGGATGGA
AACAGTGTGGCCTTGGGAGTCAAATAGTCTCTGCATGGTGGGGAGGGTCATGATGGAATATGTG
AATTTCTACTTCTAGAAGTTGTGAAATAGGCCCTGCACTTTTGCAGAATGTCCTTCCTTAAACC
TTGCTTATTCCACAATTGGAGCCGATAACATGACCTGGGCTTAGCTGCTCTAGCCCTGGGTTCT
TGAAGACCTCACTGCCTGGCCCCTGGTCATCCGCCTAACAACTGCATGCTTTCTGGTCACATGT
GGACCTTGACATGACCAAGTAGTTATATATGTGGTTGCGCAAAAGCTTTCTGTTTAATGCGTAG
TGTTATTACATCTTGGTTTTCAGTGGCACTATGTCTAGAAGGCAAAATCCTTTTAAACAGTGCT
TTGGCTAAGATAGATACTTGTGAATCAAAGATGGCAAAGAAATGAACTAAGTATATTCCATTTG
GAATTATATTTTGATACTAAGTGAATTCTTCCTAATATTTAAAATGGTTTCACCTGTCAAAGGG
CCAACAGAACTCTTGGTTTTACTTTTGTACTTACTGTACAGAAAATTTCAGGAGTGTTTGAGTG
CTTGTCATCAGGTGTTTTCCTTAGTAAGTAGGGATATGATCATTTACAGGAATTATACATGAAA
AAAGTTTTTGAAATGTATTTTTGTGGTGTGCTATGTTGAGAGGAAACCAAATATTTATGATTTT
AAAACATTCGTATGAAACTATTGTACAATGTAATATGCTCAACTTTCTCAATTTTTTGCTGATT
TTTCTAAAATACATTAAAAATGTTTTGTATTTTTTTTTAAGTAAAATGGACCCAGTAAGAAAAT
TAAAAATACCAGAATATACATTTACTGTCTGATTTAATAAAACAGTGGGGGTAAA

hide sequence

RefSeq Acc Id:

XM_008007183 ⟹ XP_008005374

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	55,077,180 - 55,156,630 (-)	NCBI
Vero_WHO_p1.0	NW_023666038	152,743,559 - 152,825,970 (-)	NCBI

Sequence:

show sequence

CGGCGGGCGGCGGACGCGGAGGCTGAGGGGCGTTCGAGGCGCCGAGGGGCTGGCTGGGCCCGAG
GGGTTGGTGGGGCAGCAGGGTCGCGGCCATGGGGAGCTTGAAGGACGAGCTGCTCAAAGCCATA
TGGCACGCCTTCACCGCACTCGACCAGGACCATAGCGGCAAGGTCTCCAAGTCCCAGCTCAAGG
TCCTTTCCCATAACTTGTGCACGGTGCTGAAGGTTCCTCATGACCCGGTTGCCCTTGAAGAGCA
CTTCAGGGATGATGATGAGGGGCCAGTGTCCAACCAGGGCTACATGCCTTATTTAAACAGGTTC
ATTTTGGAAAAGGTCCAAGACAACTTTGACAAGATTGAATTCAATAGGATGTGTTGGACCCTAT
GTGTCAAAAAAAACCTCACAAAGAATCCCCTGCTCATTACAGAAGAAGATGCATTTAAAGTATG
GGTTATTTTCAACTTTTTATCTGAGGACAAGTATCCACTAATTATTGTGTCAGAAGAGATTGAA
TACCTGCTTAAGAAGCTTACAGAAGCTATGGGAGGAGGCTGGCAGCAAGAACAATTTGAACATT
ATAAAATCAACTTTGATGACAGTAAAAATGGCCTTTCTGCGTGGGAACTTATTGAGCTTATTGG
AAATGGACAGTTTAGCAAAGGCATGGATCGGCAGACTGTGTCTATGGCAATTAATGAAGTCTTT
AATGAACTTATATTAGATGTGTTAAAACAGGGTTACATGATGAAAAAGGGCCACAGACGGAAAA
ACTGGACTGAACGATGGTTTGTACTAAAGCCGAACATAATTTCTTACTATGTGAGTGAGGATCT
GAAAGATAAGAAAGGAGACATTCTCTTAGATGAAAATTGCTGTGTAGAGTCCTTGCCTGACAAA
GATGGAAAGAAATGCCTTTTTCTCGTAAAATGTTTTGATAAGACTTTTGAAATCAGTGCTTCAG
ATAAGAAGAAGAAACAGGAGTGGATTCAAGCCATTCATTCTACTATTCATCTGTTGAAGCTGGG
CAGCCCTCCACCACACAAAGAAGCCCGCCAGCGTCGGAAAGAACTCCGGAAGAAGCAGCTGGCT
GAACAAGAGGAACTGGAGCGACAAATGAAGGAGCTCCAGGTTGCCAACGAAAGCAAGCAACAGG
AGCTGGAGGCTGTGCGGAAGATCAGACAGCAGATGGAAGAACAGGTTGCCCAAAAGTCCTCTGA
ACTGGAACAGTATTTACAGCGAGTACGGGAGCTGGAAGACATGTACCTAAAGCTGCAGGAGGCT
CTCGAAGATGAGAGACAGGCCCGGCAAGATGAAGAAACGGTGCGGAAGCTTCAGGCCAGGTTAT
TGGAGGAAGAGTCTTCCAAGAGGGCTGAACTAGAAAAGTGGCACTTGGAGCAGCAGCAGGCCAT
TCAGACAACTGAGGCGGAGAAGCAGGAGTTGGAGAATCAGCGTGTCCTGAAGGAACAGGCCCTG
CAGGAGGCCATGGAGCAGCTGGAGCAGCTTGAGTTAGAACGGAAACAAGCACTTGAGCAGTATG
AGGAAGTTAAAAAGAAGCTGGAGATGGCAACTGATAAGACCAAGAGCTGGAAGGACAAAGTGGC
CCATCATGAAGGATTAATTCGACTGATAGAACCAGGTTCAAAGAACCCTCACCTGATCACTAAC
TGGGGACCTGCAGCTTTCACTGAGGCAGAACTTGAAGAGAGAGAGAAGAACTGGAAAGAGAAAA
AGACCACGGAGTGACCGAGCTTGCTGGCAGTCACATCAGTTATGTAGATACTGCATGGCAGGAG
AGCTTTATGCTAAAGACAAAAGAAATGG

hide sequence

RefSeq Acc Id:

XM_037997546 ⟹ XP_037853474

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666038	152,743,559 - 152,825,909 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_008005368	(Get FASTA)	NCBI Sequence Viewer
	XP_008005374	(Get FASTA)	NCBI Sequence Viewer
	XP_037853474	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000000871.1

RefSeq Acc Id:	XP_008005368 ⟸ XM_008007177
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_008005374 ⟸ XM_008007183
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCSAP00000000871 ⟸ ENSCSAT00000002567

RefSeq Acc Id:	XP_037853474 ⟸ XM_037997546
- Peptide Label:	isoform X3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000004538	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000002567.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
InterPro	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PH_domain	UniProtKB/TrEMBL
KEGG Report	csab:103240441	UniProtKB/TrEMBL
NCBI Gene	SWAP70	ENTREZGENE
PANTHER	SWAP-70 RECOMBINASE	UniProtKB/TrEMBL
	SWITCH-ASSOCIATED PROTEIN 70	UniProtKB/TrEMBL
Pfam	PF00169	UniProtKB/TrEMBL
PROSITE	EF_HAND_2	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
SMART	SM00233	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF47473	UniProtKB/TrEMBL
UniProt	A0A0D9QWY2_CHLSB	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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