GULP1 (GULP PTB domain containing engulfment adaptor 1) - Rat Genome Database

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Gene: GULP1 (GULP PTB domain containing engulfment adaptor 1) Chlorocebus sabaeus
Analyze
Symbol: GULP1
Name: GULP PTB domain containing engulfment adaptor 1
RGD ID: 18517449
Description: INVOLVED IN phagocytosis, engulfment (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Neurodevelopmental Disorders (ortholog); thyroid gland disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: GULP, engulfment adaptor PTB domain containing 1; PTB domain-containing engulfment adapter protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11073,809,773 - 74,111,624 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1073,812,072 - 74,111,730 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

Genomics

Comparative Map Data
GULP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11073,809,773 - 74,111,624 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1073,812,072 - 74,111,730 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
GULP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382188,291,874 - 188,595,926 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2188,291,669 - 188,595,931 (+)EnsemblGRCh38hg38GRCh38
GRCh372189,156,601 - 189,460,653 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362188,865,635 - 189,168,898 (+)NCBINCBI36Build 36hg18NCBI36
Build 342188,982,895 - 189,286,156NCBI
Celera2182,752,718 - 183,055,486 (+)NCBICelera
Cytogenetic Map2q32.1-q32.2NCBI
HuRef2181,016,216 - 181,320,275 (+)NCBIHuRef
CHM1_12189,162,262 - 189,466,543 (+)NCBICHM1_1
T2T-CHM13v2.02188,780,647 - 189,084,760 (+)NCBIT2T-CHM13v2.0
Gulp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39144,590,540 - 44,835,998 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl144,590,671 - 44,835,998 (+)EnsemblGRCm39 Ensembl
GRCm38144,551,380 - 44,796,838 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl144,551,511 - 44,796,838 (+)EnsemblGRCm38mm10GRCm38
MGSCv37144,608,516 - 44,853,681 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36144,496,239 - 44,740,722 (+)NCBIMGSCv36mm8
Celera144,874,093 - 45,113,505 (+)NCBICelera
Cytogenetic Map1C1.1NCBI
cM Map123.63NCBI
Gulp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8954,114,823 - 54,391,058 (+)NCBIGRCr8
mRatBN7.2946,622,699 - 46,899,005 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl946,622,669 - 46,899,005 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx955,139,968 - 55,408,872 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0960,262,766 - 60,531,678 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0958,558,864 - 58,827,709 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0951,263,484 - 51,538,066 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl951,263,622 - 51,538,072 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0950,936,854 - 51,211,199 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4943,660,027 - 43,797,357 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1943,661,439 - 43,798,763 (+)NCBI
Celera944,324,563 - 44,593,413 (+)NCBICelera
Cytogenetic Map9q22NCBI
Gulp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540310,078,355 - 10,326,904 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540310,079,781 - 10,328,168 (-)NCBIChiLan1.0ChiLan1.0
GULP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21390,973,482 - 91,281,885 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B90,988,326 - 91,296,867 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B75,588,843 - 75,896,253 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B193,507,585 - 193,815,868 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B193,695,139 - 193,815,861 (+)Ensemblpanpan1.1panPan2
GULP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13630,108,886 - 30,248,805 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3630,108,947 - 30,265,896 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3629,933,071 - 30,153,420 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03630,258,468 - 30,477,052 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3630,258,144 - 30,493,449 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13630,320,360 - 30,537,846 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03630,256,077 - 30,474,116 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03630,424,784 - 30,642,561 (+)NCBIUU_Cfam_GSD_1.0
Gulp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303147,337,183 - 147,605,295 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365069,234,691 - 9,332,911 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365069,233,590 - 9,501,139 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GULP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1592,911,054 - 93,252,180 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11592,988,094 - 93,252,188 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Gulp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248991,581,309 - 1,679,498 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248991,581,299 - 1,844,391 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GULP1
5744 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 17 33 33 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007965584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_007965598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038001868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000010552   ⟹   ENSCSAP00000008643
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1073,812,072 - 74,111,730 (+)Ensembl
RefSeq Acc Id: XM_007965592   ⟹   XP_007963783
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11073,811,156 - 74,111,624 (+)NCBI
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007965595   ⟹   XP_007963786
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11073,809,773 - 74,111,616 (+)NCBI
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007965596   ⟹   XP_007963787
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11073,811,856 - 74,111,616 (+)NCBI
Vero_WHO_p1.0NW_023666040125,373,605 - 125,674,446 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007965597   ⟹   XP_007963788
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11073,812,435 - 74,111,624 (+)NCBI
Vero_WHO_p1.0NW_023666040125,373,605 - 125,673,293 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007965598   ⟹   XP_007963789
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11073,809,773 - 74,111,616 (+)NCBI
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038001857   ⟹   XP_037857785
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,674,446 (-)NCBI
RefSeq Acc Id: XM_038001858   ⟹   XP_037857786
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBI
RefSeq Acc Id: XM_038001859   ⟹   XP_037857787
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,674,446 (-)NCBI
RefSeq Acc Id: XM_038001861   ⟹   XP_037857789
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,673,293 (-)NCBI
RefSeq Acc Id: XM_038001862   ⟹   XP_037857790
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,674,446 (-)NCBI
RefSeq Acc Id: XM_038001863   ⟹   XP_037857791
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBI
RefSeq Acc Id: XM_038001864   ⟹   XP_037857792
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBI
RefSeq Acc Id: XM_038001865   ⟹   XP_037857793
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,674,446 (-)NCBI
RefSeq Acc Id: XM_038001866   ⟹   XP_037857794
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,677,143 (-)NCBI
RefSeq Acc Id: XM_038001867   ⟹   XP_037857795
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,379,925 - 125,677,143 (-)NCBI
RefSeq Acc Id: XM_038001868   ⟹   XP_037857796
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_023666040125,373,600 - 125,674,446 (-)NCBI
RefSeq Acc Id: XP_007963789   ⟸   XM_007965598
- Peptide Label: isoform X5
RefSeq Acc Id: XP_007963786   ⟸   XM_007965595
- Peptide Label: isoform X4
RefSeq Acc Id: XP_007963783   ⟸   XM_007965592
- Peptide Label: isoform X1
RefSeq Acc Id: XP_007963787   ⟸   XM_007965596
- Peptide Label: isoform X4
RefSeq Acc Id: XP_007963788   ⟸   XM_007965597
- Peptide Label: isoform X4
Ensembl Acc Id: ENSCSAP00000008643   ⟸   ENSCSAT00000010552
RefSeq Acc Id: XP_037857791   ⟸   XM_038001863
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037857794   ⟸   XM_038001866
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RJ54 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037857792   ⟸   XM_038001864
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RJ54 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037857786   ⟸   XM_038001858
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037857785   ⟸   XM_038001857
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037857793   ⟸   XM_038001865
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RJ54 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037857787   ⟸   XM_038001859
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037857796   ⟸   XM_038001868
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037857790   ⟸   XM_038001862
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037857789   ⟸   XM_038001861
- Peptide Label: isoform X1
RefSeq Acc Id: XP_037857795   ⟸   XM_038001867
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000012462 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000010552.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
InterPro Adapter_Engulfment-Domain UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PTB/PI_dom UniProtKB/TrEMBL
NCBI Gene GULP1 ENTREZGENE
PANTHER PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER UniProtKB/TrEMBL
  PTB DOMAIN-CONTAINING ENGULFMENT ADAPTER PROTEIN 1 UniProtKB/TrEMBL
Pfam PID UniProtKB/TrEMBL
PROSITE PID UniProtKB/TrEMBL
SMART PTB UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
UniProt A0A0D9RJ54 ENTREZGENE, UniProtKB/TrEMBL