ITPRIPL1 (ITPRIP like 1) - Rat Genome Database

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Gene: ITPRIPL1 (ITPRIP like 1) Chlorocebus sabaeus
Analyze
Symbol: ITPRIPL1
Name: ITPRIP like 1
RGD ID: 18482247
Description: ENCODES a protein that exhibits receptor ligand activity (inferred); INVOLVED IN negative regulation of T cell receptor signaling pathway (inferred); signal transduction (inferred); ASSOCIATED WITH intellectual disability (ortholog); prostate cancer (ortholog); schizophrenia (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: inositol 1,4,5-trisphosphate receptor interacting protein-like 1; inositol 1,4,5-trisphosphate receptor-interacting protein-like 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.114745,194 - 748,203 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl14745,331 - 750,727 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041168,171,851 - 168,176,973 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
plasma membrane  (IEA,ISO)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ITPRIPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.114745,194 - 748,203 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl14745,331 - 750,727 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041168,171,851 - 168,176,973 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ITPRIPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38296,325,317 - 96,330,507 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl296,325,317 - 96,330,517 (+)EnsemblGRCh38hg38GRCh38
GRCh37296,991,055 - 96,996,245 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36296,354,873 - 96,357,806 (+)NCBINCBI36Build 36hg18NCBI36
Celera291,432,249 - 91,435,278 (+)NCBICelera
Cytogenetic Map2q11.2NCBI
HuRef290,952,296 - 90,955,325 (+)NCBIHuRef
CHM1_1296,995,415 - 96,998,444 (+)NCBICHM1_1
T2T-CHM13v2.0296,831,925 - 96,837,116 (+)NCBIT2T-CHM13v2.0
Itpripl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392126,980,689 - 126,985,377 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2126,980,692 - 126,985,362 (-)EnsemblGRCm39 Ensembl
GRCm382127,138,769 - 127,143,457 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2127,138,772 - 127,143,442 (-)EnsemblGRCm38mm10GRCm38
MGSCv372126,964,505 - 126,969,193 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362126,831,794 - 126,834,070 (-)NCBIMGSCv36mm8
Celera2128,372,058 - 128,376,747 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map261.79NCBI
Itpripl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83134,858,316 - 134,861,241 (-)NCBIGRCr8
mRatBN7.23114,403,123 - 114,407,917 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3114,402,270 - 114,414,497 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3118,296,568 - 118,299,491 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03126,892,114 - 126,895,037 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03124,552,495 - 124,555,418 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03119,616,473 - 119,619,865 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3119,616,945 - 119,619,865 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03126,142,194 - 126,145,117 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43114,684,522 - 114,687,445 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3113,245,449 - 113,248,372 (-)NCBICelera
Cytogenetic Map3q36NCBI
Itpripl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554703,870,296 - 3,873,212 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554703,870,296 - 3,873,212 (+)NCBIChiLan1.0ChiLan1.0
ITPRIPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21231,978,369 - 31,983,541 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A31,981,128 - 31,986,287 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A102,986,844 - 102,990,391 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A97,248,026 - 97,251,064 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A97,248,026 - 97,251,064 (+)Ensemblpanpan1.1panPan2
ITPRIPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11734,419,700 - 34,424,176 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1734,190,583 - 34,195,095 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01735,190,780 - 35,195,194 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1735,191,960 - 35,193,651 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11734,314,890 - 34,319,402 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01734,377,079 - 34,381,491 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01734,595,433 - 34,599,849 (+)NCBIUU_Cfam_GSD_1.0
Itpripl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629283,172,394 - 83,176,504 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936744426,516 - 428,156 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936744425,206 - 428,220 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ITPRIPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl346,897,137 - 46,900,483 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1346,897,131 - 46,901,845 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Itpripl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247492,403,600 - 2,406,586 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247492,403,580 - 2,408,254 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ITPRIPL1
47 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000015459   ⟹   ENSCSAP00000013399
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl14745,331 - 750,727 (+)Ensembl
RefSeq Acc Id: XM_008007970   ⟹   XP_008006161
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.114745,194 - 748,203 (+)NCBI
Vero_WHO_p1.0NW_023666041168,171,851 - 168,176,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008007971   ⟹   XP_008006162
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.114745,201 - 748,203 (+)NCBI
Vero_WHO_p1.0NW_023666041168,171,851 - 168,176,973 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008006161 (Get FASTA)   NCBI Sequence Viewer  
  XP_008006162 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000013399.1
RefSeq Acc Id: XP_008006161   ⟸   XM_008007970
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RXR0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008006162   ⟸   XM_008007971
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RXR0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000013399   ⟸   ENSCSAT00000015459


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000017366 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000015459.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1410.40 UniProtKB/TrEMBL
InterPro ITPRIP_fam UniProtKB/TrEMBL
  Mab-21_dom UniProtKB/TrEMBL
  Mab-21_HhH/H2TH-like UniProtKB/TrEMBL
KEGG Report csab:103241071 UniProtKB/TrEMBL
NCBI Gene ITPRIPL1 ENTREZGENE
PANTHER CELL FATE DETERMINING PROTEIN MAB21-RELATED UniProtKB/TrEMBL
  PTHR10656:SF40 UniProtKB/TrEMBL
Pfam Mab-21_C UniProtKB/TrEMBL
PRINTS INOS145TPRIP UniProtKB/TrEMBL
SMART Mab-21 UniProtKB/TrEMBL
UniProt A0A0D9RXR0 ENTREZGENE, UniProtKB/TrEMBL