TMEM37 (transmembrane protein 37) - Rat Genome Database

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Gene: TMEM37 (transmembrane protein 37) Chlorocebus sabaeus
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Symbol: TMEM37
Name: transmembrane protein 37
RGD ID: 18473876
Description: ENCODES a protein that exhibits calcium channel activity (inferred); voltage-gated monoatomic ion channel activity (inferred); INVOLVED IN calcium ion transmembrane transport (inferred); monoatomic ion transmembrane transport (inferred); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: voltage-dependent calcium channel gamma-like subunit
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11010,885,174 - 10,892,497 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606111,795,343 - 11,802,635 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
TMEM37
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11010,885,174 - 10,892,497 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606111,795,343 - 11,802,635 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
TMEM37
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382119,429,895 - 119,438,504 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2119,429,901 - 119,438,504 (+)EnsemblGRCh38hg38GRCh38
GRCh372120,189,430 - 120,196,080 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362119,905,916 - 119,912,566 (+)NCBINCBI36Build 36hg18NCBI36
Celera2113,515,569 - 113,522,221 (+)NCBICelera
Cytogenetic Map2q14.2NCBI
HuRef2112,514,371 - 112,521,023 (+)NCBIHuRef
CHM1_12120,192,969 - 120,199,621 (+)NCBICHM1_1
T2T-CHM13v2.02119,863,369 - 119,871,962 (+)NCBIT2T-CHM13v2.0
Tmem37
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391119,995,106 - 120,001,799 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1119,995,107 - 120,001,804 (-)EnsemblGRCm39 Ensembl
GRCm381120,067,377 - 120,074,069 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1120,067,377 - 120,074,074 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,963,954 - 121,970,357 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361121,894,923 - 121,901,326 (-)NCBIMGSCv36mm8
Celera1122,725,840 - 122,732,295 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
cM Map152.6NCBI
Tmem37
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81333,737,096 - 33,743,602 (-)NCBIGRCr8
mRatBN7.21331,184,322 - 31,191,477 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1331,171,355 - 31,191,077 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1333,769,874 - 33,776,114 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01335,057,718 - 35,063,958 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01332,332,148 - 32,338,388 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01336,094,665 - 36,101,443 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1336,094,520 - 36,101,411 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01341,205,721 - 41,211,952 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1331,071,555 - 31,077,752 (-)NCBICelera
Cytogenetic Map13q11NCBI
Tmem37
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545910,272,781 - 10,279,642 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545910,271,167 - 10,279,549 (-)NCBIChiLan1.0ChiLan1.0
TMEM37
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21321,431,583 - 21,439,418 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B21,446,540 - 21,454,389 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B6,364,435 - 6,373,076 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B119,944,830 - 119,951,406 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B119,944,906 - 119,950,325 (+)Ensemblpanpan1.1panPan2
TMEM37
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11930,579,207 - 30,585,308 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1930,578,565 - 30,585,255 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1930,841,686 - 30,847,794 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01931,963,165 - 31,969,684 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11930,649,862 - 30,656,375 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01930,816,584 - 30,822,691 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01932,003,363 - 32,009,472 (-)NCBIUU_Cfam_GSD_1.0
Tmem37
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530390,693,706 - 90,699,988 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646950,918,209 - 50,924,073 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646950,917,760 - 50,924,025 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM37
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11531,778,587 - 31,790,480 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21536,045,471 - 36,053,536 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Tmem37
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473225,686,753 - 25,694,834 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473225,688,408 - 25,694,984 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_007964723   ⟹   XP_007962914
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11010,885,174 - 10,891,949 (-)NCBI
Vero_WHO_p1.0NW_02366606111,795,856 - 11,802,635 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964724   ⟹   XP_007962915
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11010,885,174 - 10,892,342 (-)NCBI
Vero_WHO_p1.0NW_02366606111,795,481 - 11,802,635 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007964725   ⟹   XP_007962916
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11010,885,174 - 10,892,497 (-)NCBI
Vero_WHO_p1.0NW_02366606111,795,343 - 11,802,635 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007962914 (Get FASTA)   NCBI Sequence Viewer  
  XP_007962915 (Get FASTA)   NCBI Sequence Viewer  
  XP_007962916 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000018167.1
RefSeq Acc Id: XP_007962916   ⟸   XM_007964725
- Peptide Label: isoform X3
RefSeq Acc Id: XP_007962915   ⟸   XM_007964724
- Peptide Label: isoform X2
- UniProtKB: A0A0D9SBC8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007962914   ⟸   XM_007964723
- Peptide Label: isoform X1
- UniProtKB: A0A0D9SBC8 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000018641 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000018731.1 UniProtKB/TrEMBL
InterPro Tmem37 UniProtKB/TrEMBL
NCBI Gene TMEM37 ENTREZGENE
PANTHER VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA-LIKE SUBUNIT UniProtKB/TrEMBL
  VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA-LIKE SUBUNIT UniProtKB/TrEMBL
Pfam TMEM37 UniProtKB/TrEMBL
UniProt A0A0D9SBC8 ENTREZGENE, UniProtKB/TrEMBL