LOC103229199 (T-complex protein 1 subunit eta-like) - Rat Genome Database

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Gene: LOC103229199 (T-complex protein 1 subunit eta-like) Chlorocebus sabaeus
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Symbol: LOC103229199
Name: T-complex protein 1 subunit eta-like
RGD ID: 18462452
Description: ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); ATP-dependent protein folding chaperone (inferred); INVOLVED IN binding of sperm to zona pellucida (inferred); chaperone mediated protein folding independent of cofactor (inferred); chaperone-mediated protein folding (inferred); FOUND IN cell body (inferred); chaperonin-containing T-complex (inferred); cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: T-complex protein 1 subunit eta pseudogene
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12443,630,762 - 43,632,379 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605331,825,036 - 31,826,759 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_037984146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_037984146   ⟹   XP_037840074
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605331,825,036 - 31,826,759 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037840074 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000011471.1
RefSeq Acc Id: XP_037840074   ⟸   XM_037984146
- UniProtKB: A0A0D9RS82 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000015413 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000013472.1 UniProtKB/TrEMBL
Gene3D-CATH GroEL UniProtKB/TrEMBL
  GroEL-like equatorial domain UniProtKB/TrEMBL
  TCP-1-like chaperonin intermediate domain UniProtKB/TrEMBL
InterPro Chap_CCT_eta UniProtKB/TrEMBL
  Chaperone_TCP-1 UniProtKB/TrEMBL
  Chaperonin_TCP-1_CS UniProtKB/TrEMBL
  Cpn60/GroEL/TCP-1 UniProtKB/TrEMBL
  GroEL-like_apical_dom_sf UniProtKB/TrEMBL
  GROEL-like_equatorial_sf UniProtKB/TrEMBL
  TCP-1-like_intermed_sf UniProtKB/TrEMBL
  TCP-1_chaperonin UniProtKB/TrEMBL
  thermosome_alpha UniProtKB/TrEMBL
NCBI Gene LOC103229199 ENTREZGENE
PANTHER CHAPERONIN UniProtKB/TrEMBL
  T-COMPLEX PROTEIN 1 SUBUNIT ETA UniProtKB/TrEMBL
Pfam Cpn60_TCP1 UniProtKB/TrEMBL
PRINTS TCOMPLEXTCP1 UniProtKB/TrEMBL
PROSITE TCP1_1 UniProtKB/TrEMBL
  TCP1_2 UniProtKB/TrEMBL
  TCP1_3 UniProtKB/TrEMBL
Superfamily-SCOP GroEL apical domain-like UniProtKB/TrEMBL
  GroEL equatorial domain-like UniProtKB/TrEMBL
  GroEL-intermediate domain like UniProtKB/TrEMBL
UniProt A0A0D9RS82 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103229199  T-complex protein 1 subunit eta-like  LOC103229199  T-complex protein 1 subunit eta pseudogene  Symbol and/or name change 5135510 APPROVED