LILRA4 (leukocyte immunoglobulin like receptor A4) - Rat Genome Database

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Gene: LILRA4 (leukocyte immunoglobulin like receptor A4) Chlorocebus sabaeus
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Symbol: LILRA4
Name: leukocyte immunoglobulin like receptor A4
RGD ID: 18452756
Description: ENCODES a protein that exhibits coreceptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN Fc-epsilon receptor signaling pathway (ortholog); negative regulation of interferon-alpha production (ortholog); negative regulation of toll-like receptor 7 signaling pathway (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); COVID-19 (ortholog); FOUND IN Fc-epsilon receptor I complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: leukocyte immunoglobulin-like receptor subfamily A member 4
RGD Orthologs
Human
Bonobo
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1647,023,469 - 47,038,665 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl647,023,620 - 47,037,336 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607327,149,008 - 27,155,007 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
LILRA4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1647,023,469 - 47,038,665 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl647,023,620 - 47,037,336 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607327,149,008 - 27,155,007 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LILRA4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381954,333,185 - 54,339,162 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1954,333,185 - 54,339,162 (-)EnsemblGRCh38hg38GRCh38
GRCh371954,844,456 - 54,850,433 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361959,536,504 - 59,542,233 (-)NCBINCBI36Build 36hg18NCBI36
Celera1951,885,612 - 51,891,341 (-)NCBICelera
Cytogenetic Map19q13.42NCBI
HuRef1951,166,567 - 51,172,296 (-)NCBIHuRef
CHM1_11954,838,440 - 54,844,169 (-)NCBICHM1_1
T2T-CHM13v2.01957,422,956 - 57,428,933 (-)NCBIT2T-CHM13v2.0
LOC100981392
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22060,362,135 - 60,369,507 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11962,286,350 - 62,293,720 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01951,287,944 - 51,294,118 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11960,128,447 - 60,134,248 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1960,128,447 - 60,134,248 (-)Ensemblpanpan1.1panPan2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000016650   ⟹   ENSCSAP00000016152
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl647,023,620 - 47,037,336 (-)Ensembl
RefSeq Acc Id: XM_037992028   ⟹   XP_037847956
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366607327,149,008 - 27,155,007 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037847956 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000016152.1
Ensembl Acc Id: ENSCSAP00000016152   ⟸   ENSCSAT00000016650
RefSeq Acc Id: XP_037847956   ⟸   XM_037992028
- UniProtKB: A0A0D9S5L3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000001880 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000016650.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro A1B_glyco/leuk_Ig-like_rcpt UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig-like_Receptors_ImmuneReg UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
NCBI Gene LILRA4 ENTREZGENE
PANTHER LEUKOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR SUBFAMILY A MEMBER 4 UniProtKB/TrEMBL
  MHC CLASS I NK CELL RECEPTOR UniProtKB/TrEMBL
Pfam Ig_2 UniProtKB/TrEMBL
  PF00047 UniProtKB/TrEMBL
PIRSF Alpha_1B_glycoprot_prd UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A0D9S5L3 ENTREZGENE, UniProtKB/TrEMBL