MCRIP1 (MAPK regulated corepressor interacting protein 1) - Rat Genome Database

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Gene: MCRIP1 (MAPK regulated corepressor interacting protein 1) Chlorocebus sabaeus
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Symbol: MCRIP1
Name: MAPK regulated corepressor interacting protein 1
RGD ID: 18396350
Description: INVOLVED IN regulation of epithelial to mesenchymal transition (inferred); FOUND IN cytoplasm (inferred); cytoplasmic stress granule (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mapk-regulated corepressor-interacting protein 1; protein FAM195B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11673,696,708 - 73,707,436 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1673,696,539 - 73,707,045 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607745,150,158 - 45,160,848 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
MCRIP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11673,696,708 - 73,707,436 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1673,696,539 - 73,707,045 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607745,150,158 - 45,160,848 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
MCRIP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381781,822,361 - 81,833,291 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1781,822,361 - 81,833,302 (-)EnsemblGRCh38hg38GRCh38
GRCh371779,780,237 - 79,791,167 (-)NCBIGRCh37GRCh37hg19GRCh37
Celera1776,383,760 - 76,394,631 (-)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1775,181,966 - 75,184,105 (-)NCBIHuRef
CHM1_11779,866,495 - 79,877,383 (-)NCBICHM1_1
T2T-CHM13v2.01782,689,526 - 82,700,456 (-)NCBIT2T-CHM13v2.0
Mcrip1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911120,433,714 - 120,440,553 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11120,433,714 - 120,440,553 (-)EnsemblGRCm39 Ensembl
GRCm3811120,542,888 - 120,549,727 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11120,542,888 - 120,549,727 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711120,404,202 - 120,411,041 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611120,358,980 - 120,365,794 (-)NCBIMGSCv36mm8
Celera11132,278,296 - 132,285,087 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1184.25NCBI
Mcrip1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810106,318,985 - 106,326,442 (-)NCBIGRCr8
mRatBN7.210105,820,656 - 105,828,146 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10105,820,656 - 105,828,271 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10110,924,820 - 110,926,871 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010110,387,847 - 110,389,898 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010105,741,104 - 105,743,155 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010109,720,144 - 109,727,595 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,720,144 - 109,722,195 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010109,313,274 - 109,320,680 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410109,933,593 - 109,935,644 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110109,948,097 - 109,950,148 (-)NCBI
Celera10104,364,211 - 104,366,262 (-)NCBICelera
Cytogenetic Map10q32.3NCBI
Mcrip1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555061,329,646 - 1,335,505 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555061,329,646 - 1,335,505 (+)NCBIChiLan1.0ChiLan1.0
MCRIP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21998,357,981 - 98,368,856 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan117103,258,751 - 103,269,655 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01776,227,462 - 76,238,363 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11781,930,301 - 81,934,404 (-)NCBIpanpan1.1PanPan1.1panPan2
MCRIP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.19443,155 - 451,741 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl9444,617 - 450,605 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha91,045,318 - 1,053,894 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.091,036,523 - 1,045,104 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.191,061,682 - 1,070,258 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.091,188,261 - 1,196,835 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.091,267,187 - 1,275,766 (+)NCBIUU_Cfam_GSD_1.0
Mcrip1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056021,050,205 - 1,055,443 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365945,356,428 - 5,361,730 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365945,356,516 - 5,361,734 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MCRIP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl121,137,816 - 1,144,555 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1121,137,797 - 1,144,556 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Mcrip1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480110,687,269 - 10,689,093 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480110,687,269 - 10,694,188 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MCRIP1
247 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence


Ensembl Acc Id: ENSCSAT00000000245   ⟹   ENSCSAP00000015809
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1673,696,539 - 73,707,045 (-)Ensembl
RefSeq Acc Id: XM_008013267   ⟹   XP_008011458
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11673,696,708 - 73,703,725 (-)NCBI
Vero_WHO_p1.0NW_02366607745,150,158 - 45,154,217 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013272   ⟹   XP_008011463
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11673,696,708 - 73,707,436 (-)NCBI
Vero_WHO_p1.0NW_02366607745,150,158 - 45,160,845 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008013274   ⟹   XP_008011465
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11673,696,708 - 73,707,436 (-)NCBI
Vero_WHO_p1.0NW_02366607745,150,158 - 45,160,848 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008011458 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011463 (Get FASTA)   NCBI Sequence Viewer  
  XP_008011465 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000015809.1
RefSeq Acc Id: XP_008011465   ⟸   XM_008013274
- Peptide Label: isoform X3
RefSeq Acc Id: XP_008011463   ⟸   XM_008013272
- Peptide Label: isoform X2
RefSeq Acc Id: XP_008011458   ⟸   XM_008013267
- Peptide Label: isoform X1
- UniProtKB: A0A0D9S4M0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000015809   ⟸   ENSCSAT00000000245


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000002225 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000000245.1 UniProtKB/TrEMBL
InterPro MCRIP UniProtKB/TrEMBL
NCBI Gene MCRIP1 ENTREZGENE
Pfam FAM195 UniProtKB/TrEMBL
UniProt A0A0D9S4M0 ENTREZGENE, UniProtKB/TrEMBL